The University of Queensland

Management of Plant Pathogen Collections, 2nd edition

Shivas, Roger G., Kiss, Levente, Geering, Andrew D. W. and McTaggart, Alistair R. (2023). Management of Plant Pathogen Collections, 2nd edition. East Toowoomba, QLD Australia: Australasian Plant Pathology Society.

Shorebirds of Australia

Andrew D. W. Geering, Lindsay Agnew and Sandra Harding eds. (2007). Shorebirds of Australia. Collingwood, VIC, Australia: CSIRO Publishing.

Banana streak disease : an illustrated field guide

Daniells, Jeff W., Thomas, John E. and Geering, Andrew D. W. (1999). Banana streak disease : an illustrated field guide. Brisbane, QLD, Australia: Queensland Department of Primary Industries.

Banana streak disease

Geering, Andrew D. W. (2024). Banana streak disease. Achieving sustainable cultivation of bananas – Volume 3: Diseases and pests. (pp. 343-364) edited by André Drenth and Gert H. J. Kema. Cambridge, United Kingdom: Burleigh Dodds Science Publishing. doi: 10.19103/AS.2022.0108.14

Other viral pathogens of banana

Geering, Andrew D. W. (2024). Other viral pathogens of banana. Achieving sustainable cultivation of bananas Volume 3: Diseases and pests. (pp. 365-390) edited by André Drenth and Gert H. J. Kema. Cambridge, United Kingdom: Burleigh Dodds Science Publishing. doi: 10.19103/AS.2022.0108.15

Badnaviruses (Caulimoviridae)

Geering, Andrew D.W. (2021). Badnaviruses (Caulimoviridae). Encyclopedia of Virology. (pp. 158-168) Amsterdam, Netherlands: Academic Press. doi: 10.1016/B978-0-12-814515-9.00147-8

Caulimoviridae (Plant Pararetroviruses)

Geering, Andrew D. W. (2019). Caulimoviridae (Plant Pararetroviruses). Encyclopedia of Life Sciences. (pp. 1-11) Hoboken, NJ United States: John Wiley & Sons. doi: 10.1002/9780470015902.a0000746.pub4

Avocado Sunblotch Viroid

Kuhn, David N., Geering, Andrew D. W. and Dixon, Jonathan (2017). Avocado Sunblotch Viroid. Viroids and Satellites. (pp. 297-305) edited by Hadidi, A., Flores, R., Randles, J. W. and Palukaitis, P.. London, United Kingdom: Academic Press. doi: 10.1016/B978-0-12-801498-1.00028-0

Geographical distribution of viroids in Oceania

Geering, Andrew D. W. (2017). Geographical distribution of viroids in Oceania. Viroids and satellites. (pp. 497-506) edited by Ahmed Hadidi, Ricardo Flores, John W. Randles and Peter Palukaitis. London, United Kingdom: Academic Press. doi: 10.1016/B978-0-12-801498-1.00046-2

Caulimoviridae (Plant Pararetroviruses)

Geering, Andrew D. W. (2014). Caulimoviridae (Plant Pararetroviruses). Encyclopedia of Life Sciences. (pp. 1-10) Hoboken, NJ United States: John Wiley & Sons. doi: 10.1002/9780470015902.a0000746.pub3

Virus diseases of tropical crops

Geering, Andrew D. W. and Randles, John W. (2012). Virus diseases of tropical crops. Encyclopedia of Life Sciences. (pp. 1-12) Hoboken, NJ United States: John Wiley & Sons. doi: 10.1002/9780470015902.a0000767.pub2

Family - Caulimoviridae

Geering, Andrew D. W. and Hull, Roger (2012). Family - Caulimoviridae. Virus Taxonomy Virus Taxonomy: Ninth Report of the International Committee on Taxonomy of Viruses. (pp. 429-443) edited by Andrew M. Q. King, Michael J. Adams, Eric B. Carstens and Elliot J. Lefkowitz. London, United Kingdom: Elsevier. doi: 10.1016/B978-0-12-384684-6.00040-9

Molecular Markers for Plant Biosecurity

Geering, Andrew D. W. (2012). Molecular Markers for Plant Biosecurity. Molecular Markers in Plants. (pp. 99-117) edited by Robert J. Henry. Hoboken NJ, United States: Blackwell Publishing Ltd.. doi: 10.1002/9781118473023.ch7

Endogenous viral sequences in plant genomes

Teycheney, Pierre-Yves and Geering, Andrew D.W. (2011). Endogenous viral sequences in plant genomes. Recent Advances in Plant Virology. (pp. 343-362) edited by Carole Caranta, Miguel A. Aranda, Mark Tepfer and Juan José Lopéz-Moya. Norfolk, United Kingdom: Caister Academic Press.

Evolutionary history and taxonomy

Geering, Andrew D. W. (2007). Evolutionary history and taxonomy. Shorebirds of Australia. (pp. 1-7) edited by Andrew D. W. Geering, Lindsay Agnew and Sandra Harding. Victoria, Australia: CSIRO Pubishing.

Preface

Geering, Andrew, Agnew, Lindsay and Harding, Sandra (2007). Preface. Shorebirds of Australia. (pp. VII-IX) edited by Andrew D.W. Geering, Lindsay Agnew and Sandra Harding. Collingwood, VIC, Australia: CSIRO Publishing.

Threats to shorebirds and conservation actions

Harding, Sandra B., Wilson, Jim R. and Geering, Andrew D. W. (2007). Threats to shorebirds and conservation actions. Shorebirds of Australia. (pp. 197-213) edited by Andrew D. W. Geering, Lindsay Agnew and Sandra Harding. Victoria, Australia: CSIRO Pubishing.

Banana and plantain

Thomas, J. E., Geering, A. D. W., Dahal, G., Lockhart, B. E. L. and Thottappilly, G. (2003). Banana and plantain. Virus and virus-like diseases of major crops in developing countries. (pp. 477-496) edited by Loebenstein, Gad and Thottappilly, George . Dordrecht ; London: Kluwer Academic. doi: 10.1007/978-94-007-0791-7

Why a strategic shift in action is needed to recognise and empower Indigenous plant pathology knowledge and research

Ehau-Taumaunu, H., Williams, N. M., Marsh, A., Waipara, N. W., Higgins, C. M., Geering, A. D.W., Mesarich, C. H., Rigano, L. A., Summerell, B. A., Johnson, G. I., Williamson, P. and MacDiarmid, R. M. (2024). Why a strategic shift in action is needed to recognise and empower Indigenous plant pathology knowledge and research. Australasian Plant Pathology, 53 (3), 211-219. doi: 10.1007/s13313-024-00977-5

Molecular characterisation of a novel sadwavirus infecting cattleya orchids in Australia

Tran, Nga T., Campbell, Paul R., Crew, Kathleen S. and Geering, Andrew D. W. (2024). Molecular characterisation of a novel sadwavirus infecting cattleya orchids in Australia. Archives of Virology, 169 (3) 68, 68. doi: 10.1007/s00705-024-05980-1

The contributions of Rupert Best to the modern concept of the nature of viruses

Geering, Andrew D. W. (2024). The contributions of Rupert Best to the modern concept of the nature of viruses. Historical Records of Australian Science. doi: 10.1071/hr23022

The untold history of banana bunchy top disease

Geering, Andrew D. W. (2024). The untold history of banana bunchy top disease. Historical Records of Australian Science. doi: 10.1071/hr24001

The discovery of tomato spotted wilt virus

Geering, Andrew D. W. (2023). The discovery of tomato spotted wilt virus. Historical Records of Australian Science. doi: 10.1071/hr23015

Endogenous Caulimovirids: fossils, zombies, and living in plant genomes

Vassilieff, Héléna, Geering, Andrew D. W., Choisne, Nathalie, Teycheney, Pierre-Yves and Maumus, Florian (2023). Endogenous Caulimovirids: fossils, zombies, and living in plant genomes. Biomolecules, 13 (7) 1069. doi: 10.3390/biom13071069

A fungal pathogen is unlikely to be the cause of abnormal vertical growth syndrome in macadamia

Zakeel, Mohamed C. M., Geering, Andrew D. W. and Akinsanmi, Olufemi A. (2023). A fungal pathogen is unlikely to be the cause of abnormal vertical growth syndrome in macadamia. Plant Pathology, 72 (4), 731-741. doi: 10.1111/ppa.13689

Rational design of a survey protocol for avocado sunblotch viroid in commercial orchards to demonstrate pest freedom

Bonnéry, D. B., Pretorius, L-S., Jooste, A. E.C., Geering, A. D. W. and Gilligan, C. A. (2023). Rational design of a survey protocol for avocado sunblotch viroid in commercial orchards to demonstrate pest freedom. PLoS One, 18 (4) e0277725, 1-16. doi: 10.1371/journal.pone.0277725

Surveillance for Avocado Sunblotch Viroid Utilizing the European Honey Bee (Apis mellifera)

Roberts, John M. K., Jooste, Anna E. C., Pretorius, Lara-Simone and Geering, Andrew D. W. (2023). Surveillance for Avocado Sunblotch Viroid Utilizing the European Honey Bee (Apis mellifera). Phytopathology, 113 (3), 559-566. doi: 10.1094/PHYTO-08-22-0295-R

A reverse transcription loop-mediated isothermal amplification assay for the detection of citrus exocortis viroid in Australian citrus

Chambers, Grant A., Geering, Andrew D. W., Holford, Paul, Kehoe, Monica A., Vidalakis, Georgios and Donovan, Nerida J. (2023). A reverse transcription loop-mediated isothermal amplification assay for the detection of citrus exocortis viroid in Australian citrus. Australasian Plant Pathology, 52 (2), 121-132. doi: 10.1007/s13313-023-00903-1

Extreme resilience of avocado sunblotch viroid RNA in sampled avocado leaves and fruit

Pretorius, Lara-Simone and Geering, Andrew D. W. (2023). Extreme resilience of avocado sunblotch viroid RNA in sampled avocado leaves and fruit. Australasian Plant Pathology, 52 (1), 1-4. doi: 10.1007/s13313-022-00898-1

CAULIFINDER: a pipeline for the automated detection and annotation of caulimovirid endogenous viral elements in plant genomes

Vassilieff, Héléna, Haddad, Sana, Jamilloux, Véronique, Choisne, Nathalie, Sharma, Vikas, Giraud, Delphine, Wan, Mariène, Serfraz, Saad, Geering, Andrew D. W., Teycheney, Pierre-Yves and Maumus, Florian (2022). CAULIFINDER: a pipeline for the automated detection and annotation of caulimovirid endogenous viral elements in plant genomes. Mobile DNA, 13 (1) 31, 1-12. doi: 10.1186/s13100-022-00288-w

Presence and distribution of banana bunchy top virus in Laos

Chittarath, Khonesavanh, Crew, Kathleen S., Geering, Andrew D. W., Rungsawang, Wasana, Kong, Gary, Pongsapich, Preyapan and Thomas, John E. (2022). Presence and distribution of banana bunchy top virus in Laos. Australasian Plant Disease Notes, 17 (1) 36. doi: 10.1007/s13314-022-00482-y

Genome sequence of pineapple secovirus B, a second sadwavirus reported infecting Ananas comosus

Larrea-Sarmiento, Adriana, Geering, Andrew D. W., Olmedo-Velarde, Alejandro, Wang, Xupeng, Borth, Wayne, Matsumoto, Tracie K., Suzuki, Jon Y., Wall, Marisa M., Melzer, Michael, Moyle, Richard, Sharman, Murray, Hu, John and Thomas, John E. (2022). Genome sequence of pineapple secovirus B, a second sadwavirus reported infecting Ananas comosus. Archives of Virology, 167 (12), 1-4. doi: 10.1007/s00705-022-05590-9

Untangling the taxonomy of dahlia mosaic virus

Geering, Andrew D. W., McTaggart, Alistair R. and Teycheney, Pierre-Yves (2022). Untangling the taxonomy of dahlia mosaic virus. Archives of Virology, 167 (11), 2325-2329. doi: 10.1007/s00705-022-05567-8

Detection of two poleroviruses infecting garlic (Allium sativum) in Australia

Nurulita, Sari, Geering, Andrew D. W., Crew, Kathleen S., Harper, Stephen M. and Thomas, John E. (2022). Detection of two poleroviruses infecting garlic (Allium sativum) in Australia. Australasian Plant Pathology, 51 (4), 461-465. doi: 10.1007/s13313-022-00870-z

Bermuda grass latent virus in Australia: genome sequence, sequence variation, and new hosts

Tran, Nga T., Teo, Ai Chin, Crew, Kathleen S., Thomas, John E., Campbell, Paul R. and Geering, Andrew D. W. (2022). Bermuda grass latent virus in Australia: genome sequence, sequence variation, and new hosts. Archives of Virology, 167 (5), 1317-1323. doi: 10.1007/s00705-022-05434-6

Adaptation of a filter paper method for RNA template preparation for the detection of avocado sunblotch viroid by reverse transcription qPCR

Pretorius, Lara-Simone, Chandra, Kerri A., Jooste, Anna E.C., Motaung, Lebogang C., Parkinson, Louisamarie E. and Geering, Andrew D.W. (2022). Adaptation of a filter paper method for RNA template preparation for the detection of avocado sunblotch viroid by reverse transcription qPCR. Journal of Virological Methods, 301 114455, 114455. doi: 10.1016/j.jviromet.2022.114455

An updated register of viruses and viroids that infect ornamental, turf and native plant species in Australia

Geering, Andrew D.W. and Thomas, John E (2022). An updated register of viruses and viroids that infect ornamental, turf and native plant species in Australia. Australasian Plant Pathology, 51 (2), 135-139. doi: 10.1007/s13313-021-00849-2

Viruses infecting greenhood orchids (Pterostylidinae) in Eastern Australia

Chao, Hsu-Yao, Clements, Mark A., Mackenzie, Anne M., Dietzgen, Ralf G., Thomas, John E. and Geering, Andrew D. W. (2022). Viruses infecting greenhood orchids (Pterostylidinae) in Eastern Australia. Viruses, 14 (2) 365. doi: 10.3390/v14020365

Development of a one-step RT-qPCR detection assay for the newly described citrus viroid VII

Chambers, Grant A., Geering, Andrew D.W., Holford, Paul, Vidalakis, Georgios and Donovan, Nerida J. (2022). Development of a one-step RT-qPCR detection assay for the newly described citrus viroid VII. Journal of Virological Methods, 299 114330, 114330. doi: 10.1016/j.jviromet.2021.114330

Discovery of Single Nucleotide Polymorphisms for Resistance to Abnormal Vertical Growth in Macadamia

Zakeel, Mohamed Cassim Mohamed, Alam, Mobashwer, Geering, Andrew D. W., Topp, Bruce and Akinsanmi, Olufemi A. (2021). Discovery of Single Nucleotide Polymorphisms for Resistance to Abnormal Vertical Growth in Macadamia. Frontiers in Plant Science, 12 756815, 756815. doi: 10.3389/fpls.2021.756815

Characterisation of novel endogenous geminiviral elements in macadamia

Zakeel, Mohamed C. M., Geering, Andrew D. W., Thomas, John E. and Akinsanmi, Olufemi A. (2021). Characterisation of novel endogenous geminiviral elements in macadamia. BMC Genomics, 22 (1) 858, 858. doi: 10.1186/s12864-021-08174-0

Fungal Planet description sheets: 1284-1382

Crous, P. W., Osieck, E. R., Jurjevi, Z., Boers, J., Van Iperen, A. L., Starink-Willemse, M., Dima, B., Balashov, S., Bulgakov, T. S., Johnston, P. R., Morozova, O., Pinruan, U., Sommai, S., Alvarado, P., Decock, C. A., Lebel, T., McMullan-Fisher, S., Moreno, G., Shivas, R. G., Zhao, L., Abdollahzadeh, J., Abrinbana, M., Ageev, D., Akhmetova, G., Alexandrova, A., Altes, A., Amaral, A. G. G., Angelini, C., Antonin, ... Groenewald, J. Z. (2021). Fungal Planet description sheets: 1284-1382. Persoonia, 47, 178-374. doi: 10.3767/persoonia.2021.47.06

Genome sequence and geographic distribution of a new nepovirus infecting Stenotaphrum secundatum in Australia

Tran, Nga T., Teo, Ai Chin, Crew, Kathleen S., Campbell, Paul R., Thomas, John E. and Geering, Andrew D.W. (2021). Genome sequence and geographic distribution of a new nepovirus infecting Stenotaphrum secundatum in Australia. Virus Research, 305 198554, 198554. doi: 10.1016/j.virusres.2021.198554

Insertion of badnaviral DNA in the late blight resistance gene (R1a) of brinjal eggplant (Solanum melongena)

Serfraz, Saad, Sharma, Vikas, Maumus, Florian, Aubriot, Xavier, Geering, Andrew D. W. and Teycheney, Pierre-Yves (2021). Insertion of badnaviral DNA in the late blight resistance gene (R1a) of brinjal eggplant (Solanum melongena). Frontiers in Plant Science, 12 683681, 683681. doi: 10.3389/fpls.2021.683681

Molecular detection of putative pathogens to determine any role in a causal relationship with abnormal vertical growth syndrome of macadamia

Zakeel, Mohamed C. M., Akinsanmi, Olufemi A. and Geering, Andrew D. W. (2021). Molecular detection of putative pathogens to determine any role in a causal relationship with abnormal vertical growth syndrome of macadamia. European Journal of Plant Pathology, 161 (2), 427-437. doi: 10.1007/s10658-021-02333-5

Complete genome sequences and properties of Spartina mottle virus isolates from hybrid Bermuda grass (Cynodon dactylon × Cynodon transvaalensis)

Thomas, John E., Raymond, Myriam, Tran, Nga T., Crew, Kathleen S., Teo, Ai Chin and Geering, Andrew D. W. (2021). Complete genome sequences and properties of Spartina mottle virus isolates from hybrid Bermuda grass (Cynodon dactylon × Cynodon transvaalensis). Plant Pathology, 70 (5), 1062-1071. doi: 10.1111/ppa.13357

Complete genome sequence of aucuba ringspot virus

Uke, Ayaka, Pinili, Marita S., Natsuaki, Keiko T. and Geering, Andrew D. W. (2021). Complete genome sequence of aucuba ringspot virus. Archives of Virology, 166 (4), 1227-1230. doi: 10.1007/s00705-021-04977-4

First report of garlic virus E in Australia

Nurulita, Sari, Geering, Andrew D. W., Crew, Kathleen S., Harper, Stephen and Thomas, John E. (2020). First report of garlic virus E in Australia. Australasian Plant Disease Notes, 15 (1) 32. doi: 10.1007/s13314-020-00400-0

Sugarcane mosaic virus infects Stenotaphrum secundatum in Australia

Tran, Nga T., Teo, Ai Chin, Thomas, John E., Crew, Kathleen S. and Geering, Andrew D. W. (2020). Sugarcane mosaic virus infects Stenotaphrum secundatum in Australia. Australasian Plant Disease Notes, 15 (1) 41, 1-4. doi: 10.1007/s13314-020-00410-y

Identification of putative viroplasms within banana cells infected by banana streak MY virus

Ngo, By Thu Ha, Webb, Richard, Crew, Kathleen S., Vance, Megan E., Thomas, John E. and Geering, Andrew D. W. (2020). Identification of putative viroplasms within banana cells infected by banana streak MY virus. Journal of General Virology, 101 (12), 1305-1312. doi: 10.1099/jgv.0.001498

ICTV Virus taxonomy profile: Caulimoviridae

Teycheney, Pierre-Yves, Geering, Andrew D. W., Dasgupta, Idranil, Hull, Roger, Kreuze, Jan F., Lockhart, Ben, Muller, Emmanuelle, Olszewski, Neil, Pappu, Hanu, Pooggin, Mikhail M., Richert-Pöggeler, Katja R., Schoelz, James E., Seal, Susan, Stavolone, Livia, Umber, Marie and ICTV Report Consortium (2020). ICTV Virus taxonomy profile: Caulimoviridae. Journal of General Virology, 101 (10), 1025-1026. doi: 10.1099/jgv.0.001497

Spatiotemporal spread of abnormal vertical growth of macadamia in Australia informs epidemiology

Zakeel, Mohamed C. M., Geering, Andrew D. W. and Akinsanmi, Olufemi A. (2020). Spatiotemporal spread of abnormal vertical growth of macadamia in Australia informs epidemiology. Phytopathology, 110 (7), PHYTO10190396R-1304. doi: 10.1094/phyto-10-19-0396-r

Demonstrating pest-freedom from avocado sunblotch viroid with a smartphone app and improved detection methods

Parkinson, L. E., Pretorius, L-S. and Geering, A. D. W. (2020). Demonstrating pest-freedom from avocado sunblotch viroid with a smartphone app and improved detection methods. Talking Avocados, 31 (1), 63-66.

Couch smut, an economically important disease of Cynodon dactylon in Australia

Tran, N. T., McTaggart, A. R., Drenth, A., Shivas, R. G., Loch, D. S., Kruse, J. and Geering, A. D. W. (2020). Couch smut, an economically important disease of Cynodon dactylon in Australia. Australasian Plant Pathology, 49 (2), 87-94. doi: 10.1007/s13313-020-00680-1

First report of a carlavirus infecting plants in the Fabaceae in Australia

Persley, D., Steele, V., Sharman, M., Campbell, P., Geering, A. and Gambley, C. (2020). First report of a carlavirus infecting plants in the Fabaceae in Australia. New Disease Reports, 41 (1), 26-26. doi: 10.5197/j.2044-0588.2020.041.026

Three novel Ambrosia Fusarium Clade species producing clavate macroconidia known (F. floridanum and F. obliquiseptatum) or predicted (F. tuaranense) to be farmed by Euwallacea spp. (Coleoptera: Scolytinae) on woody hosts

Aoki, Takayuki, Smith, Jason A., Kasson, Matthew T., Freeman, Stanley, Geiser, David M., Geering, Andrew D. W. and O'Donnell, Kerry (2019). Three novel Ambrosia Fusarium Clade species producing clavate macroconidia known (F. floridanum and F. obliquiseptatum) or predicted (F. tuaranense) to be farmed by Euwallacea spp. (Coleoptera: Scolytinae) on woody hosts. Mycologia, 111 (6), 1-17. doi: 10.1080/00275514.2019.1647074

Building biosecurity capacity

Parkinson, L. E. and Geering, A. D. W. (2019). Building biosecurity capacity. Talking Avocados, 30 (2), 54-55.

A highly sensitive method to detect avocado sunblotch viroid for the maintenance of infection-free avocado germplasm collections

Kuhn, David N, Freeman, Barbie, Geering, Andrew and Chambers, Alan H (2019). A highly sensitive method to detect avocado sunblotch viroid for the maintenance of infection-free avocado germplasm collections. Viruses, 11 (6) 512, 512. doi: 10.3390/v11060512

Xylella fastidiosa, a high priority biosecurity threat for the Australian avocado industry

Geering, Andrew and Parkinson, Louisa (2019). Xylella fastidiosa, a high priority biosecurity threat for the Australian avocado industry. Talking Avocados, 30 (1), 49-50.

Questions surrounding the taxonomic validity of the species Garlic mite-borne filamentous virus (genus Allexivirus)

Geering, Andrew D. W. and McTaggart, Alistair R. (2019). Questions surrounding the taxonomic validity of the species Garlic mite-borne filamentous virus (genus Allexivirus). Archives of Virology, 164 (9), 2367-2370. doi: 10.1007/s00705-019-04333-7

Biosecurity update on ambrosia beetles associated with avocado tree dieback

Parkinson, Louisa and Geering, Andrew (2018). Biosecurity update on ambrosia beetles associated with avocado tree dieback. Talking Avocados, 29 (3), 54-56.

A review of the status of Avocado sunblotch viroid in Australia

Geering, Andrew D. W. (2018). A review of the status of Avocado sunblotch viroid in Australia. Australasian Plant Pathology, 47 (6), 555-559. doi: 10.1007/s13313-018-0592-6

Diversity of gall-forming rusts (Uromycladium, Pucciniales) on Acacia in Australia

Doungsa-ard, C., McTaggart, A. R., Geering, A. D. W. and Shivas, R. G. (2018). Diversity of gall-forming rusts (Uromycladium, Pucciniales) on Acacia in Australia. Persoonia, 40 (1), 221-238. doi: 10.3767/persoonia.2018.40.09

Ortervirales: a new viral order unifying five families of reverse-transcribing viruses

Krupovic, Mart, Blomberg, Jonas, Coffin, John M., Dasgupta, Indranil, Fan, Hung, Geering, Andrew D., Gifford, Robert, Harrach, Balázs, Hull, Roger, Johnson, Welkin, Kreuze, Jan F., Lindemann, Dirk, Llorens, Carlos, Lockhart, Ben, Mayer, Jens, Muller, Emmanuelle, Olszewski, Neil, Pappu, Hanu R., Pooggin, Mikhail, Richert-Pöggeler, Katja R., Sabanadzovic, Sead, Sanfaçon, Hélène, Schoelz, James E., Seal, Susan, Stavolone, Livia, Stoye, Jonathan P., Teycheney, Pierre-Yves, Tristem, Michael, Koonin, Eugene V. and Kuhn, Jens H. (2018). Ortervirales: a new viral order unifying five families of reverse-transcribing viruses. Journal of Virology, 92 (12) e00515-18, e00515-18. doi: 10.1128/JVI.00515-18

Detection of “Candidatus Liberibacter solanacearum” in tomato on Norfolk Island, Australia

Thomas, J. E., Geering, A. D.W. and Maynard, G. (2018). Detection of “Candidatus Liberibacter solanacearum” in tomato on Norfolk Island, Australia. Australasian Plant Disease Notes, 13 (1) 7, 6-7. doi: 10.1007/s13314-018-0289-2

Tracheophyte genomes keep track of the deep evolution of the Caulimoviridae

Diop, Seydina Issa, Geering, Andrew D W, Alfama-Depauw, Françoise, Loaec, Mikaël, Teycheney, Pierre-Yves and Maumus, Florian (2018). Tracheophyte genomes keep track of the deep evolution of the Caulimoviridae. Scientific reports, 8 (1) 572, 1-9. doi: 10.1038/s41598-017-16399-x

Abnormal vertical growth syndrome in macadamia – how widespread, what causes it?

Akinsanmi, Olufemi A., Geering, Andrew D.W., Pandit, Pratibala, Topp, Bruce , O'Hare, P., Mulo, S. and Searle, C. (2017). Abnormal vertical growth syndrome in macadamia – how widespread, what causes it?. Australian Macadamia Society News Bulletin, 45 (4), 57-59.

First record of Papaya ringspot virus in Cambodia and confirmation of its presence in Laos

Chittarath, Khonesavanh, So, Thavrith, Sor, Sarika, Rungsawang, Wasana, Pongsapich, Preyapan, Kong, Gary, Thomas, John E. and Geering, Andrew D. W. (2017). First record of Papaya ringspot virus in Cambodia and confirmation of its presence in Laos. Australasian Plant Disease Notes, 12 (1) 58. doi: 10.1007/s13314-017-0283-0

First fully sequenced genome of an Australian isolate of Cauliflower mosaic virus

Pretorius, Lara, Moyle, Richard L., Dalton-Morgan, Jessica, Schwinghamer, Mark W., Crew, Kathy, Schenk, Peer M. and Geering, Andrew D. W. (2017). First fully sequenced genome of an Australian isolate of Cauliflower mosaic virus. Australasian Plant Pathology, 46 (6), 597-599. doi: 10.1007/s13313-017-0520-1

First records of the potyviruses Chilli ringspot virus and Shallot yellow stripe virus from Laos

Chittarath, Khonesavanh, Rungsawang, Wasana, Pongsapich, Preyapan, Kong, Gary A., Thomas, John E. and Geering, Andrew D. W. (2017). First records of the potyviruses Chilli ringspot virus and Shallot yellow stripe virus from Laos. Australasian Plant Disease Notes, 12 (1) 53, 1-2. doi: 10.1007/s13314-017-0278-x

Novel mastreviruses identified in Australian wild rice

Kraberger, Simona, Geering, Andrew D. W., Walters, Matthew, Martin, Darren P. and Varsani, Arvind (2017). Novel mastreviruses identified in Australian wild rice. Virus Research, 238, 193-197. doi: 10.1016/j.virusres.2017.07.003

Characterization of the banana streak virus capsid protein and mapping of the immunodominant continuous B-cell epitopes to the surfaceexposed N terminus

Vo, Jenny N., Campbell, Paul R., Mahfuz, Nur N., Ramli, Ras, Pagendam, Daniel, Barnard, Ross and Geering, Andrew D. W. (2016). Characterization of the banana streak virus capsid protein and mapping of the immunodominant continuous B-cell epitopes to the surfaceexposed N terminus. Journal of General Virology, 97 (12) 000643, 3446-3457. doi: 10.1099/jgv.0.000643

Identification of rust fungi (Pucciniales) on species of Allium in Australia

McTaggart, Alistair R., Shivas, Roger G., Doungsa-ard, Chanintorn, Weese, Terri L., Beasley, Dean R., Hall, Barbara H., Metcalf, Dean A. and Geering, Andrew D. W. (2016). Identification of rust fungi (Pucciniales) on species of Allium in Australia. Australasian Plant Pathology, 45 (6), 581-592. doi: 10.1007/s13313-016-0445-0

Wongia gen. nov. (Papulosaceae, Sordariomycetes), a new generic name for two root-infecting fungi from Australia

Khemmuk, Wanporn, Geering, Andrew D. W. and Shivas, Roger G. (2016). Wongia gen. nov. (Papulosaceae, Sordariomycetes), a new generic name for two root-infecting fungi from Australia. Ima Fungus, 7 (2), 247-252. doi: 10.5598/imafungus.2016.07.02.04

Ongoing geographical spread of Tomato yellow leaf curl virus

Mabvakure, Batsirai, Martin, Darren P., Kraberger, Simona, Cloete, Leendert, van Brunschot, Sharon, Geering, Andrew D. W., Thomas, John E., Bananej, Kaveh, Lett, Jean-Michel, Lefeuvre, Pierre, Varsani, Arvind and Harkins, Gordon W. (2016). Ongoing geographical spread of Tomato yellow leaf curl virus. Virology, 498, 257-264. doi: 10.1016/j.virol.2016.08.033

Erratum to: Identification of rust fungi (Pucciniales) on species of Allium in Australia (Australasian Plant Pathology, (2016), 45, 6, (581-592), 10.1007/s13313-016-0445-0)

McTaggart, Alistair R., Shivas, Roger G., Doungsa-ard, Chanintorn, Weese, Terri L., Beasley, Dean R., Hall, Barbara H., Metcalf, Dean A. and Geering, Andrew D. W. (2016). Erratum to: Identification of rust fungi (Pucciniales) on species of Allium in Australia (Australasian Plant Pathology, (2016), 45, 6, (581-592), 10.1007/s13313-016-0445-0). Australasian Plant Pathology, 45 (6), 593-594. doi: 10.1007/s13313-016-0451-2

Fungi associated with foliar diseases of wild and cultivated rice (Oryza spp.) in northern Queensland

Khemmuk, Wanporn, Shivas, Roger G., Henry, Robert and Geering, Andrew D. W. (2016). Fungi associated with foliar diseases of wild and cultivated rice (Oryza spp.) in northern Queensland. Australasian Plant Pathology, 45 (3), 297-308. doi: 10.1007/s13313-016-0418-3

Genome organization and host range of a Brazilian isolate of johnsongrass mosaic virus

Camelo-Garcia, Viviana Marcela, da Silva Andrade, Sonia Cristina, Geering, Andrew D. W., Kitajima, Elliot Watanabe and Rezende, Jorge A. M. (2016). Genome organization and host range of a Brazilian isolate of johnsongrass mosaic virus. Archives of Virology, 161 (5), 1335-1341. doi: 10.1007/s00705-016-2772-4

A co-evolutionary relationship exists between Endoraecium (Pucciniales) and its Acacia hosts in Australia

McTaggart, A. R., Doungsa-ard, C., Geering, A. D. W., Aime, M. C. and Shivas, R. G. (2015). A co-evolutionary relationship exists between Endoraecium (Pucciniales) and its Acacia hosts in Australia. Persoonia, 35 (1), 50-62. doi: 10.3767/003158515X687588

Fungal Planet description sheets: 371-399

Crous, P. W., Wingfield, M. J., Le Roux, J. J., Richardson, D. M., Strasberg, D., Shivas, R. G., Alvarado, P., Edwards, J., Moreno, G., Sharma, R., Sonawane, M. S., Tan, Y. P., Altes, A., Barasubiye, T., Barnes, C. W., Blanchette, R. A., Boertmann, D., Bogo, A., Carlavilla, J. R., Cheewangkoon, R., Daniel, R., de Beer, Z. W., de Jesus Yanez-Morales, M., Duong, T. A., Fernandez-Vicente, J., Geering, A. D. W., Guest, D. I., Held, B. W., Heykoop, M. ... Groenewald, J. Z. (2015). Fungal Planet description sheets: 371-399. Persoonia, 35 (1), 264-327. doi: 10.3767/003158515X690269

Improved methods for the purification and enrichment of banana streak virus for antibody production and protein detection

Vo, Jenny N., Mahfuz, Nur Nabihah, Lockhart, Benham E. L. and Geering, Andrew D. W. (2015). Improved methods for the purification and enrichment of banana streak virus for antibody production and protein detection. European Journal of Plant Pathology, 143 (3), 619-626. doi: 10.1007/s10658-015-0708-6

Fungal Planet description sheets: 320–370

Crous, P. W., Wingfield, M. J., Guarro, J., Hernandez-Restrepo, M., Sutton, D. A., Acharya, K., Barber, P. A., Boekhout, T., Dimitrov, R. A., Duenas, M., Dutta, A. K., Gene, J., Gouliamova, D. E., Groenewald, M., Lombard, L., Morozova, O. V., Sarkar, J., Smith, M. Th., Stchigel, A. M., Wiederhold, N. P., Alexandrova, A. V., Antelmi, I., Armengol, J., Barnes, I., Cano-Lira, J. F., Castaneda Ruiz, R. F., Contu, M., Courtecuisse, Pr. R., da Silveira, A. L. ... Groenewald, J. Z. (2015). Fungal Planet description sheets: 320–370. Persoonia: Molecular Phylogeny and Evolution of Fungi, 34 (1), 167-266. doi: 10.3767/003158515X688433

Uromycladium falcatarium sp. nov., the cause of gall rust on Paraserianthes falcataria in south-east Asia

Doungsa-ard, Chanintorn, McTaggart, Alistair R., Geering, Andrew D. W., Dalisay, Teresita U., Ray, Jane and Shivas, Roger G. (2015). Uromycladium falcatarium sp. nov., the cause of gall rust on Paraserianthes falcataria in south-east Asia. Australasian Plant Pathology, 44 (1), 25-30. doi: 10.1007/s13313-014-0301-z

Endogenous florendoviruses are major components of plant genomes and hallmarks of virus evolution

Geering, Andrew D. W., Maumus, Florian, Copetti, Dario, Choisne, Nathalie, Zwickl, Derrick J., Zytnicki, Matthias, McTaggart, Alistair R., Scalabrin, Simone, Vezzulli, Silvia, Wing, Rod A., Quesneville, Hadi and Teycheney, Pierre-Yves (2014). Endogenous florendoviruses are major components of plant genomes and hallmarks of virus evolution. Nature Communications, 5 (1) 5269, 5269.1-5269.11. doi: 10.1038/ncomms6269

Uredinopsis pteridis and Desmella aneimiae, the first rust fungi (Pucciniales) reported on ferns (Pteridophyta) in Australia

McTaggart, A. R., Geering, A. D. W. and Shivas, R. G. (2014). Uredinopsis pteridis and Desmella aneimiae, the first rust fungi (Pucciniales) reported on ferns (Pteridophyta) in Australia. Australasian Plant Disease Notes, 9 (149) 149, 1-4. doi: 10.1007/s13314-014-0149-7

The rusts on Goodeniaceae and Stylidiaceae

McTaggart, Alistair R., Geering, Andrew D. W. and Shivas, Roger G. (2014). The rusts on Goodeniaceae and Stylidiaceae. Mycological Progress, 13 (4) 989, 1017-1025. doi: 10.1007/s11557-014-0989-8

A bead-based suspension array for the multiplexed detection of begomoviruses and their whitefly vectors

van Brunschot, S. L., Bergervoet, J. H. W., Pagendam, D. E., de Weerdt, M., Geering, A. D. W., Drenth, A. and van der Vlugt, R. A. A. (2014). A bead-based suspension array for the multiplexed detection of begomoviruses and their whitefly vectors. Journal of Virological Methods, 198, 86-94. doi: 10.1016/j.jviromet.2013.12.014

An outbreak of Potato spindle tuber viroid in tomato is linked to imported seed

van Brunschot, S. L., Verhoeven, J. Th, J., Persley, D. M., Geering, A. D. W., Drenth, A. and Thomas, J. E. (2014). An outbreak of Potato spindle tuber viroid in tomato is linked to imported seed. European Journal of Plant Pathology, 139 (1), 1-7. doi: 10.1007/s10658-014-0379-8

Development of a multiplexed bead-based suspension array for the detection and discrimination of Pospiviroid plant pathogens

van Brunschot, Sharon L., Bergervoet, Jan H. W., Pagendam, Daniel E., de Weerdt, Marjanne, Geering, Andrew D. W., Drenth, André and van der Vlugt, René A. A. (2014). Development of a multiplexed bead-based suspension array for the detection and discrimination of Pospiviroid plant pathogens. PLoS One, 9 (1) e84743, e84743.1-e84743.12. doi: 10.1371/journal.pone.0084743

Panel of real-time PCRs for the multiplexed detection of two tomato-infecting begomoviruses and their cognate whitefly vector species

van Brunschot, S. L., Gambley, C. F., De Barro, P. J., Grams, R., Thomas, J. E., Henderson, J., Drenth, A. and Geering, A. D. W. (2013). Panel of real-time PCRs for the multiplexed detection of two tomato-infecting begomoviruses and their cognate whitefly vector species. Plant Pathology, 62 (5), 1132-1146. doi: 10.1111/ppa.12033

An inordinate fondness for Fusarium: phylogenetic diversity of fusaria cultivated by ambrosia beetles in the genus Euwallacea on avocado and other plant hosts

Kasson, Matthew T., O'Donnell, Kerry, Rooney, Alejandro P., Sink, Stacy, Ploetz, Randy C., Ploetz, Jill N., Konkol, Joshua L., Carrillo, Daniel, Freeman, Stanley, Mendel, Zvi, Smith, Jason A., Black, Adam W., Hulcr, Jiri, Bateman, Craig, Stefkova, Kristyna, Campbell, Paul R., Geering, Andrew D. W., Dann, Elizabeth K., Eskalen, Akif, Mohotti, Keerthi, Short, Dylan P. G., Aoki, Takayuki, Fenstermacher, Kristi A., Davis, Donald D. and Geiser, David M. (2013). An inordinate fondness for Fusarium: phylogenetic diversity of fusaria cultivated by ambrosia beetles in the genus Euwallacea on avocado and other plant hosts. Fungal Genetics and Biology, 56, 147-157. doi: 10.1016/j.fgb.2013.04.004

Thekopsora minima causes blueberry rust in south-eastern Queensland and northern New South Wales

McTaggart, A. R., Geering, A. D. W. and Shivas, R. G. (2013). Thekopsora minima causes blueberry rust in south-eastern Queensland and northern New South Wales. Australasian Plant Disease Notes, 8 (1), 81-83. doi: 10.1007/s13314-013-0101-2

A historical overview of the appearance and spread of Musa pests and pathogens on the African continent: highlighting the importance of clean Musa planting materials and quarantine measures

Blomme, G., Ploetz, R., Jones, D., De Langhe, E., Price, N., Gold, C., Geering, A., Viljoen, A., Karamura, D., Pillay, M., Tinzaara, W., Teycheney, P. -Y., Lepoint, P., Karamura, E. and Buddenhagen, I. (2013). A historical overview of the appearance and spread of Musa pests and pathogens on the African continent: highlighting the importance of clean Musa planting materials and quarantine measures. Annals of Applied Biology, 162 (1), 4-26. doi: 10.1111/aab.12002

Taxonomic revision of Ustilago, Sporisorium and Macalpinomyces

McTaggart, A. R., Shivas, R. G., Geering, A. D. W., Vanky, K. and Scharaschkin, T. (2012). Taxonomic revision of Ustilago, Sporisorium and Macalpinomyces. Persoonia, 29 (1), 116-132. doi: 10.3767/003158512X661462

A review of the Ustilago-Sporisorium-Macalpinomyces complex

McTaggart, A. R., Shivas, R. G., Geering, A. D. W., Vanky, K. and Scharaschkin, T. (2012). A review of the Ustilago-Sporisorium-Macalpinomyces complex. Persoonia, 29 (1), 55-62. doi: 10.3767/003158512X660283

Australian monocot-infecting mastrevirus diversity rivals that in Africa

Kraberger, Simona, Thomas, John E., Geering, Andrew D. W., Dayaram, Anisha, Stainton, Daisy, Hadfield, James, Walters, Matthew, Parmenter, Kathleen S., van Brunschot, Sharon, Collings, David A., Martin, Darren P. and Varsani, Arvind (2012). Australian monocot-infecting mastrevirus diversity rivals that in Africa. Virus Research, 169 (1), 127-136. doi: 10.1016/j.virusres.2012.07.018

Soral synapomorphies are significant for the systematics of the Ustilago-Sporisorium-Macalpinomyces complex (Ustilaginaceae)

McTaggart, A. R., Shivas, R. G., Geering, A. D. W., Callaghan, B., Vanky, K. and Scharaschkin, T. (2012). Soral synapomorphies are significant for the systematics of the Ustilago-Sporisorium-Macalpinomyces complex (Ustilaginaceae). Persoonia, 29 (1), 63-77. doi: 10.3767/003158512X660562

Paspalum striate mosaic virus: An Australian mastrevirus from Paspalum dilatatum

Geering, Andrew D. W., Thomas, John E., Holton, Timothy, Hadfield, James and Varsani, Arvind (2012). Paspalum striate mosaic virus: An Australian mastrevirus from Paspalum dilatatum. Archives of Virology, 157 (1), 193-197. doi: 10.1007/s00705-011-1129-2

Outbreak of angular leaf spot, caused by Xanthomonas fragariae, in a Queensland strawberry germplasm collection

Young, Anthony J., Marney, Thomas S., Herrington, Mark, Hutton, Don, Gomez, Apollo O., Villiers, Adam, Campbell, Paul R. and Geering, Andrew D. W. (2011). Outbreak of angular leaf spot, caused by Xanthomonas fragariae, in a Queensland strawberry germplasm collection. Australasian Plant Pathology, 40 (3), 286-292. doi: 10.1007/s13313-011-0045-y

Complete genome sequence of a novel badnavirus, banana streak IM virus

Geering, Andrew D. W., Parry, Judith N. and Thomas, John E. (2011). Complete genome sequence of a novel badnavirus, banana streak IM virus. Archives of Virology, 156 (4), 733-737. doi: 10.1007/s00705-011-0946-7

Tomato yellow leaf curl virus in Australia: distribution, detection and discovery of naturally occurring defective DNA molecules

Van Brunschot, S. L., Persley, D. M., Geering, A. D. W., Campbell, P. R. and Thomas, J. E. (2010). Tomato yellow leaf curl virus in Australia: distribution, detection and discovery of naturally occurring defective DNA molecules. Australasian Plant Pathology, 39 (5), 412-423. doi: 10.1071/AP10083

The classification and nomenclature of endogenous viruses of the family Caulimoviridae

Geering, Andrew D. W., Scharaschkin, Tanya and Teycheney, Pierre-Yves (2010). The classification and nomenclature of endogenous viruses of the family Caulimoviridae. Archives of Virology, 155 (1), 123-131. doi: 10.1007/s00705-009-0488-4

Development of an immunomagnetic capture-reverse transcriptase-PCR assay for three pineapple ampeloviruses

GambleyCF, GeeringADW and ThomasJE (2008). Development of an immunomagnetic capture-reverse transcriptase-PCR assay for three pineapple ampeloviruses. Journal of Virological Methods, 155 (2), 187-192. doi: 10.1016/j.jviromet.2008.10.006

Identification of viral and non-viral reverse transcribing elements in pineapple ( Ananas comosus ), including members of two new badnavirus species

GambleyCF, GeeringADW, SteeleV and ThomasJE (2008). Identification of viral and non-viral reverse transcribing elements in pineapple ( Ananas comosus ), including members of two new badnavirus species. Archives of Virology, 153 (8), 1599-1604. doi: 10.1007/s00705-008-0160-4

The genetic diversity of ampeloviruses in Australian pineapples and their association with mealybug wilt disease

GambleyCF, SteeleV, GeeringADW and ThomasJE (2008). The genetic diversity of ampeloviruses in Australian pineapples and their association with mealybug wilt disease. Australasian Plant Pathology, 37 (2), 95-105. doi: 10.1071/AP07096

The diversity of Banana streak virus isolates in Uganda

Harper, G., Hart, D., Moult, S., Hull, R., Geering, A. and Thomas, J. (2005). The diversity of Banana streak virus isolates in Uganda. Archives of Virology, 150 (12), 2407-2420. doi: 10.1007/s00705-005-0610-1

Characterisation of Banana streak Mysore virus and evidence that its DNA is integrated in the B genome of cultivated Musa

Geering, A. D. W., Pooggin, M. M., Olszewski, N. E., Lockhart, B. E. L. and Thomas, J. E. (2005). Characterisation of Banana streak Mysore virus and evidence that its DNA is integrated in the B genome of cultivated Musa. Archives of Virology, 150 (4), 787-796. doi: 10.1007/s00705-004-0471-z

Banana contains a diverse array of endogenous badnaviruses

Geering, Andrew D. W., Olszewski, Neil E., Harper, Glyn, Lockhart, Benham E. L., Hull, Roger and Thomas, John E. (2005). Banana contains a diverse array of endogenous badnaviruses. Journal of General Virology, 86 (2), 511-520. doi: 10.1099/vir.0.80261-0

Identification of Rubus yellow net virus as a distinct badnavirus and its detection by PCR in Rubus species and in aphids

Jones, A. Teifion, McGavin, Wendy J., Geering, A. D. W. and Lockhart, B. E. L. (2002). Identification of Rubus yellow net virus as a distinct badnavirus and its detection by PCR in Rubus species and in aphids. Annals of Applied Biology, 141 (1), 1-10. doi: 10.1111/j.1744-7348.2002.tb00189.x

A new badnavirus in Ribes species, its detection by PCR, and its close association with gooseberry vein banding disease

Jones, A. T., McGavin, W. J., Geering, A. D. W. and Lockhart, B. E. L. (2001). A new badnavirus in Ribes species, its detection by PCR, and its close association with gooseberry vein banding disease. Plant Disease, 85 (4), 417-422. doi: 10.1094/PDIS.2001.85.4.417

The effect of Banana streak virus on the growth and yield of dessert bananas in tropical Australia

Daniells, J. W., Geering, A. D. W., Bryde, N. J. and Thomas, J. E. (2001). The effect of Banana streak virus on the growth and yield of dessert bananas in tropical Australia. Annals of Applied Biology, 139 (1), 51-60. doi: 10.1111/j.1744-7348.2001.tb00130.x

Genetic diversity among banana streak virus isolates from Australia (vol 90, pg 921, 2000)

Geering, ADW, McMichael, LA, Dietzgen, RG and Thomas, JE (2000). Genetic diversity among banana streak virus isolates from Australia (vol 90, pg 921, 2000). PHYTOPATHOLOGY, 90 (11), 1295-1295.

Genetic diversity among Banana streak virus isolates from Australia

Geering, A. D. W., McMichael, L. A., Dietzgen, R. G. and Thomas, J. E. (2000). Genetic diversity among Banana streak virus isolates from Australia. Phytopathology, 90 (8), 921-927. doi: 10.1094/PHYTO.2000.90.8.921

Confirmation of the presence of Rice tungro bacilliform virus in Papua (formerly Irian Jaya), Indonesia

Davis, R. I., Parry, J. N., Geering, A. D. W., Thomas, J. E. and Rahamma, S. (2000). Confirmation of the presence of Rice tungro bacilliform virus in Papua (formerly Irian Jaya), Indonesia. Australasian Plant Pathology, 29 (3), 223-223. doi: 10.1071/AP00040

First records of Banana streak virus on the island of New Guinea

Davis, R. I., Geering, A. D. W., Thomas, J. E., Gunua, T. G. and Rahamma, S. (2000). First records of Banana streak virus on the island of New Guinea. Australasian Plant Pathology, 29 (4), 281-281. doi: 10.1071/AP00053

Characterisation of a virus from Australia that is closely related to papaya mosaic potexvirus

Geering, A. D. W. and Thomas, J. E. (1999). Characterisation of a virus from Australia that is closely related to papaya mosaic potexvirus. Archives of Virology, 144 (3), 577-592. doi: 10.1007/s007050050526

Purification, properties, and diagnosis of banana bract mosaic potyvirus and its distinction from abaca mosaic potyvirus

Thomas, J. E., Geering, A. D. W., Gambley, C. F., Kessling, A. F. and White, M. (1997). Purification, properties, and diagnosis of banana bract mosaic potyvirus and its distinction from abaca mosaic potyvirus. Phytopathology, 87 (7), 698-705. doi: 10.1094/PHYTO.1997.87.7.698

Search for alternative hosts of banana bunchy top virus in Australia

Geering, A. D. W. and Thomas, J. E. (1997). Search for alternative hosts of banana bunchy top virus in Australia. Australasian Plant Pathology, 26 (4), 250-254. doi: 10.1071/AP97040

A comparison of four serological tests for the detection of banana bunchy top virus in banana

Geering, A. D. W. and Thomas, J. E. (1996). A comparison of four serological tests for the detection of banana bunchy top virus in banana. Australian Journal of Agricultural Research, 47 (3), 403-412. doi: 10.1071/AR9960403

Analysis of the nucleocapsid gene of lettuce necrotic yellows rhabdovirus

Wetzel, T., Dietzgen, R. G., Geering, A. D. W. and Dale, J. L. (1994). Analysis of the nucleocapsid gene of lettuce necrotic yellows rhabdovirus. Virology, 202 (2) 71438, 1054-1057. doi: 10.1006/viro.1994.1438

Interactions between a seed-borne strain of cucumber mosaic cucumovirus and its lupin host

Geering, A. D. W. and Randles, J. W. (1994). Interactions between a seed-borne strain of cucumber mosaic cucumovirus and its lupin host. Annals of Applied Biology, 124 (2), 301-314. doi: 10.1111/j.1744-7348.1994.tb04135.x

Development of highly sensitive RT-PCR assays for universal detection of orthotospoviruses and internal control in thrips testing

Chao, H., Geering, A., Thomas, J. and Dietzgen, R. (2023). Development of highly sensitive RT-PCR assays for universal detection of orthotospoviruses and internal control in thrips testing. 24th Biennial Conference of the Australasian Plant Pathology Society, Adelaide, SA Australia, 20-24 November 2023.

Pioneering discoveries in plant virology from Australia (what lessons can we learn from history?

Geering, Andrew (2023). Pioneering discoveries in plant virology from Australia (what lessons can we learn from history?. 24th Biennial Conference of the Australasian Plant Pathology Society, Adelaide, SA Australia, 20-24 November 2023.

Abnormal vertical growth syndrome in macadama

Mohamed Cassim, Mohamed Zakeel, Geering, Andrew and Akinsanmi, Olufemi (2023). Abnormal vertical growth syndrome in macadama. 12th International Congress of Plant Pathology, Lyon, France, 20-25 August 2023.

Biological and molecular characterisation of citrus viroid VII

Chambers, Grant, Donovan, Nerida, Holford, Paul, Vidalakis, Georgios, Bogema, Daniel and Geering, Andrew (2023). Biological and molecular characterisation of citrus viroid VII. 12th International Congress of Plant Pathology, Lyon, France, 20-25 August 2023.

Understanding the population structure and pathogenicity of Bipolaris oryzae on commercial and wild Australian rices

Morrison, Sabrina M.L., McTaggart, Alistair R., Tran, Nga T., Geering, Andrew D. W., Furtado, Agnelo and Henry, Robert J. (2023). Understanding the population structure and pathogenicity of Bipolaris oryzae on commercial and wild Australian rices. 12th International Congress of Plant Pathology, Lyon, France, 20-25 August 2023.

Viruses are associated with buffalo grass yellowing in Australia

Tran, Nga, Teo, Ai Chin, McTaggart, Alistair, Thomas, John, Campbell, Paul, Persley, Denis and Geering, Andrew (2023). Viruses are associated with buffalo grass yellowing in Australia. 12th International Congress of Plant Pathology, Lyon, France, 20-25 August 2023.

Distribution and genetic diversity of sugarcane mosaic virus in turf grasses in Australia

Tran, Nga T. , McTaggart, Alistair , Teo, Ai Chin , Persley, Denis , Thomas, John and Geering, Andrew (2022). Distribution and genetic diversity of sugarcane mosaic virus in turf grasses in Australia. Australasian Plant Virology Workshop, Melbourne, Australia, 5-7 December 2022.

Buffalo grass yellowing – an emerging threat to the Australian turf industry

Tran, N. T., Thomas, J. E. and Geering, A. D. W. (2021). Buffalo grass yellowing – an emerging threat to the Australian turf industry. Australasian Plant Pathology Conference , Online, 23-26 November 2021.

Biology and epidemiology of smut (Ustilago cynodontis) in couch grass

Tran, N. T., McTaggart, A. R., Drenth, A., Shivas, R. G., Loch, D. S. and Geering, A. D. W. (2019). Biology and epidemiology of smut (Ustilago cynodontis) in couch grass. Australasian Plant Pathology Conference, Melbourne, Australia, 25-28 November 2019.

Phylogeny of Fusarium associated with Euwallacea-vectored branch dieback of avocado and other woody tree hosts in Australia

Parkinson, L. E., Bransgrove, K., Dann, E. K. and Geering, A. D. W. (2019). Phylogeny of Fusarium associated with Euwallacea-vectored branch dieback of avocado and other woody tree hosts in Australia. Australasian Plant Pathology Society 22nd Biennial Conference - Strong Foundations, Future Innovations, Melbourne, VIC Australia, 25–28 November 2019. South Melbourne, VIC, Australia: ICMS Australasia.

Distribution of Ustilago cynodontis within couch grass plants

Tran, N. T., McTaggart, A. R., Drenth, A., Shivas, R. G., Loch, D. S. and Geering, A. D. W. (2019). Distribution of Ustilago cynodontis within couch grass plants. TropAg Conference, Brisbane, QLD, Australia, 11-13 November 2019.

Biosecurity capacity building for the Australian avocado industry

Parkinson, L. E., Bransgrove, K., Dann, E. K. and Geering, A. D. W. (2019). Biosecurity capacity building for the Australian avocado industry. IX World Avocado Congress, Medellín, Colombia, 23–27 September 2019. World Avocado Congress.

Biosecurity capacity for the Australian avocado industry

Parkinson, L. E., Bransgrove, K., Dann, E. K. and Geering, A. D. W. (2019). Biosecurity capacity for the Australian avocado industry. International Tropical Agriculture Conference (TropAg) 2019, Brisbane, QLD Australia, 11–13 November 2019. MDPI.

New achievements for diagnostics of banana streak virus

Ngo, Ha, Crew, Kathy S., Vance, Megan, Thomas, John, Nguyen, Son, Duarte, Tania, Coin, Lachlan and Geering, Andrew (2019). New achievements for diagnostics of banana streak virus. Australasian Plant Pathology Society 22nd Biennial Conference, Melbourne, Australia, 26-28 November 2019. Melbourne, Australia:

Contribution of Fusarium spp. to sugarcane yellow canopy syndrome (YCS) in Australia

Basnayake, S., Czislowski, E., Olsen, D., Basnayake, J., Aitken, E. and Geering, A. (2018). Contribution of Fusarium spp. to sugarcane yellow canopy syndrome (YCS) in Australia. International Congress of Plant Pathology (ICPP), Boston, Massachusetts, 29 July - 3 August 2018. St Paul, MN, United States: American Phytopathological Society.

An inordinate fondness for Fusarium: Phylogenetic diversity of fusaria cultivated by Euwallacea ambrosia beetles on avocado and other plant hosts

Kasson, M. T., O'Donnell, K., Rooney, A. P., Sink, S., Ploetz, R. C., Ploetz, J. N., Konkol, J. L., Carrillo, D., Freeman, S., Mendel, Z., Smith, J. A., Black, A. W., Hulcr, J., Bateman, C., Stefkova, K., Campbell, P. R., Geering, A. D. W., Dann, E. K., Eskalen, A., Mohotti, K., Short, D. P. G., Aoki, T., Fenstermacher, K. A., Davis, D. D. and Geiser, D. M. (2013). An inordinate fondness for Fusarium: Phylogenetic diversity of fusaria cultivated by Euwallacea ambrosia beetles on avocado and other plant hosts. APS-MSA Joint Meeting, Austin, TX United States, 10=14 August 2013. Paul, MN United States: American Phytopathological Society.

The systematics of Endoraecium in Australia

Mctaggart, A. R., Doungsa-Ard, C., Geering, A., Aime, M. C. and Shivas, R. G. (2013). The systematics of Endoraecium in Australia. 2013 APS-MSA Joint Meeting, Austin, U.S.A., August 10–14, 2013. St. Paul, United States: American Phytopathological Society. doi: 10.1094/PHYTO-103-6-S2.1

The distribution of badnavirus-infected Musa germplasm from the International Transit Centre, Katholieke Universiteit Leuven, Belgium

Geering, A. D. W. (2009). The distribution of badnavirus-infected Musa germplasm from the International Transit Centre, Katholieke Universiteit Leuven, Belgium. International Symposium on Recent Advances in Banana Crop Protection for Sustainable Production and Improved Livelihoods, White River, South Africa, 10-14 September, 2007. Leuven, Belgium: International Society for Horticultural Science.

Viral pathogens of banana: outstanding questions and options for control

Geering, A. D. W. (2009). Viral pathogens of banana: outstanding questions and options for control. International Symposium on Recent Advances in Banana Crop Protection for Sustainable Production and Improved Livelihoods, White River, South Africa, 1 May 2009. Leuven, Belgium: International Society for Horticultural Science.

Partial characterization of two aphid-transmitted viruses associated with yellow leafspot of Spiraea

Lockhart, BEL and Geering, ADW (2002). Partial characterization of two aphid-transmitted viruses associated with yellow leafspot of Spiraea. 10th International Symposium on Virus Diseases of Ornamental Plants, Annapolis Md, May 27-Jun 01, 2000. LEUVEN 1: INTERNATIONAL SOCIETY HORTICULTURAL SCIENCE. doi: 10.17660/ActaHortic.2002.568.24

Promoters from Australian Banana streak Badna-Virus (BSV) isolates drive transgene expression in Banana, Sugarcane and Tobacco

Remans, T., Schenk, P. M., Elliot, A. R., Sagi, L., Geering, A. D., McMichael, L. A., Thomas, J.E., Swennen, R. L., Grof, C. P., Manners, J. and Ebert, P.R. (1999). Promoters from Australian Banana streak Badna-Virus (BSV) isolates drive transgene expression in Banana, Sugarcane and Tobacco. ComBio 99, Conrad Jupiters, Gold Coast, 27-30 September, 1999. Kent Town, SA: Australian Society for Biochemistry and Molecular Biology.

Pineapple, pararetroviruses and retrotransposons

Gambley, Cherie F., Steele, Visnja, Geering, Andrew D. W. and Thomas, John E. (1997). Pineapple, pararetroviruses and retrotransposons. XIII International Congress of Virology, San Francisco, CA United States, 23-28 July 1997.

Sanger sequence data

Mohamed Zakeel, Mohamed Cassim, Olufemi, Akinsanmi and Andrew, Geering (2021). Sanger sequence data. The University of Queensland. (Dataset) doi: 10.14264/f801edd

Project update: understanding buffalo yellowing

Tran, N. T. and Geering, A. D. W. (2020, 06 30). Project update: understanding buffalo yellowing Turf Industry Magazine 10-12.

Smut research: overcoming giggles to find an industry solution

Tran, N. T. and Geering, A. D. W. (2018, 08 09). Smut research: overcoming giggles to find an industry solution Turf Industry Magazine 12-13.

Deciphering the onion rust complex

Geering, A., McTaggart, A., Doungsa-ard, C. and Shivas, R. (2013, 01 01). Deciphering the onion rust complex Onions Australia Magazine 26-27.

Sunblotch disease - past, present or never a problem?

Geering, Andrew D.W. and Steele, Visnja (2008, 01 01). Sunblotch disease - past, present or never a problem? Talking Avocados 28-29.

Plant and viral promoters PMP Schenk, L Sagi, S Remy, RL Swennen, RG Dietzgen, ADW Geering, LA McMichael, JE Thomas, CPL Grof, AR Elliott. CSIRO, 2002. United States Patent US 6,391,639 B1.

Schenk, P. M. P., Sagi, L., Remy, S., Swennen, R. L., Dietzgen, R. G., Geering, A. D. W., McMichael, L. A. , Thomas, J. E. , Grof, C. P. L. and Elliott, A. R. (2002). Plant and viral promoters PMP Schenk, L Sagi, S Remy, RL Swennen, RG Dietzgen, ADW Geering, LA McMichael, JE Thomas, CPL Grof, AR Elliott. CSIRO, 2002. United States Patent US 6,391,639 B1.. US Patent 6,391,639 B1.

Pest and disease diagnosis

Geering, Andrew D.W. (2001, 01 01). Pest and disease diagnosis Australian Bananas 32-33.