The University of Queensland

Automated bone segmentation from large field of view 3D MR images of the hip joint

Xia, Ying, Fripp, Jurgen, Chandra, Shekhar S., Schwarz, Raphael, Engstrom, Craig and Crozier, Stuart (2013). Automated bone segmentation from large field of view 3D MR images of the hip joint. Physics in Medicine and Biology, 58 (20), 7375-7390. doi: 10.1088/0031-9155/58/20/7375

Promoting assessment efficacy through an integrated system for online clinical assessment of practical skills

Hay, Peter J., Engstrom, Craig, Green, Anita, Friis, Peter, Dickens, Sue and Macdonald, Doune (2013). Promoting assessment efficacy through an integrated system for online clinical assessment of practical skills. Assessment and Evaluation in Higher Education, 38 (5), 520-535. doi: 10.1080/02602938.2012.658019

Segmentation of the quadratus lumborum muscle using statistical shape modeling

Engstrom, Craig M., Fripp, Jurgen, Jurcak, Valer, Walker, Duncan G., Salvado, Olivier and Crozier, Stuart (2011). Segmentation of the quadratus lumborum muscle using statistical shape modeling. Journal of Magnetic Resonance Imaging, 33 (6), 1422-1429. doi: 10.1002/jmri.22188

Pars interarticularis stress lesions in the lumbar spine of cricket fast bowlers

Engstrom, C. M. and Walker, D. G. (2007). Pars interarticularis stress lesions in the lumbar spine of cricket fast bowlers. Medicine and Science in Sports and Exercise, 39 (1), 28-33. doi: 10.1249/01.mss.0000241642.82725.ac

Quadratus lumborum asymmetry and L4 Pars injury in fast bowlers: A prospective MR study

Engstrom, C. M., Walker, D. G., Kippers, V. and Mehnert, A. J. H. (2007). Quadratus lumborum asymmetry and L4 Pars injury in fast bowlers: A prospective MR study. Medicine and Science in Sports and Exercise, 39 (6), 910-917. doi: 10.1249/mss.0b013e3180408e25

Temporal co-ordination of human gait

Abernethy, Bruce, Burgess-Limerick, Robin, Engstrom, Craig, Hanna, Alastair and Neal, Robert J. (1995). Temporal co-ordination of human gait. Motor control and sensory motor integration: Issues and directions. (pp. 171-196) edited by Denis J. Glencross and Jan Piek. Amsterdam, Netherlands: Elsevier.

Automated anomaly-aware 3D segmentation of bones and cartilages in knee MR images from the Osteoarthritis Initiative

Woo, Boyeong, Engstrom, Craig, Baresic, William, Fripp, Jurgen, Crozier, Stuart and Chandra, Shekhar S. (2024). Automated anomaly-aware 3D segmentation of bones and cartilages in knee MR images from the Osteoarthritis Initiative. Medical Image Analysis, 93 103089, 103089. doi: 10.1016/j.media.2024.103089

Analysis of cam location characteristics in FAI syndrome patients from 3D MR images demonstrates sex‐specific differences

Bugeja, Jessica M., Xia, Ying, Chandra, Shekhar S., Murphy, Nicholas J., Crozier, Stuart, Hunter, David J., Fripp, Jurgen and Engstrom, Craig (2024). Analysis of cam location characteristics in FAI syndrome patients from 3D MR images demonstrates sex‐specific differences. Journal of Orthopaedic Research, 42 (2), 385-394. doi: 10.1002/jor.25674

CAN3D: Fast 3D medical image segmentation via compact context aggregation

Dai, Wei, Woo, Boyeong, Liu, Siyu, Marques, Matthew, Engstrom, Craig, Greer, Peter B., Crozier, Stuart, Dowling, Jason A. and Chandra, Shekhar S. (2022). CAN3D: Fast 3D medical image segmentation via compact context aggregation. Medical Image Analysis, 82 102562, 1-17. doi: 10.1016/j.media.2022.102562

Automated 3D analysis of clinical magnetic resonance images demonstrates significant reductions in cam morphology following arthroscopic intervention in contrast to physiotherapy

Bugeja, Jessica M., Xia, Ying, Chandra, Shekhar S., Murphy, Nicholas J., Eyles, Jillian, Spiers, Libby, Crozier, Stuart, Hunter, David J., Fripp, Jurgen and Engstrom, Craig (2022). Automated 3D analysis of clinical magnetic resonance images demonstrates significant reductions in cam morphology following arthroscopic intervention in contrast to physiotherapy. Arthroscopy, Sports Medicine, and Rehabilitation, 4 (4), e1353-e1362. doi: 10.1016/j.asmr.2022.04.020

Automated volumetric and statistical shape assessment of cam-type morphology of the femoral head-neck region from clinical 3D magnetic resonance images

Bugeja, Jessica M., Xia, Ying, Chandra, Shekhar S., Murphy, Nicholas J., Eyles, Jillian, Spiers, Libby, Crozier, Stuart, Hunter, David J., Fripp, Jurgen and Engstrom, Craig (2022). Automated volumetric and statistical shape assessment of cam-type morphology of the femoral head-neck region from clinical 3D magnetic resonance images. Quantitative Imaging in Medicine and Surgery, 12 (10), 4941. doi: 10.21037/qims-22-332

Automated analysis of immediate reliability of T2 and T2* relaxation times of hip joint cartilage from 3 T MR examinations

Bugeja, Jessica M., Chandra, Shekhar S., Neubert, Aleš, Fripp, Jurgen, Lockard, Carly A., Ho, Charles P., Crozier, Stuart and Engstrom, Craig (2021). Automated analysis of immediate reliability of T2 and T2* relaxation times of hip joint cartilage from 3 T MR examinations. Magnetic Resonance Imaging, 82, 42-54. doi: 10.1016/j.mri.2021.06.008

Integrated multi-modal antenna with coupled radiating structures (I-MARS) for 7T pTx body MRI

Destruel, Aurelien, Jin, Jin, Weber, Ewald, Li, Mingyan, Engstrom, Craig, Liu, Feng and Crozier, Stuart (2021). Integrated multi-modal antenna with coupled radiating structures (I-MARS) for 7T pTx body MRI. IEEE Transactions on Medical Imaging, 41 (1), 1-13. doi: 10.1109/TMI.2021.3103654

Discrete element and finite element methods provide similar estimations for hip joint contact mechanics during walking gait

Li, Mao, Venäläinen, Mikko S., Chandra, Shekhar S., Patel, Rushabh, Fripp, Jurgen, Engstrom, Craig, Korhonen, Rami K., Töyräs, Juha and Crozier, Stuart (2021). Discrete element and finite element methods provide similar estimations for hip joint contact mechanics during walking gait. Journal of Biomechanics, 115 110163, 1-11. doi: 10.1016/j.jbiomech.2020.110163

Simultaneous super-resolution and contrast synthesis of routine clinical magnetic resonance images of the knee for improving automatic segmentation of joint cartilage: data from the Osteoarthritis Initiative

Neubert, Aleš, Bourgeat, Pierrick, Wood, Jason, Engstrom, Craig, Chandra, Shekhar S., Crozier, Stuart and Fripp, Jurgen (2020). Simultaneous super-resolution and contrast synthesis of routine clinical magnetic resonance images of the knee for improving automatic segmentation of joint cartilage: data from the Osteoarthritis Initiative. Medical Physics, 47 (10) mp.14421, 4939-4948. doi: 10.1002/mp.14421

High-grade intramuscular tendon disruption in acute hamstring injury and return to play in Australian football players

Eggleston, Luke, McMeniman, Morgan and Engstrom, Craig (2020). High-grade intramuscular tendon disruption in acute hamstring injury and return to play in Australian football players. Scandinavian Journal of Medicine and Science in Sports, 30 (6) sms.13642, 1073-1082. doi: 10.1111/sms.13642

Quantitative mapping of acute and chronic PCL pathology with 3 T MRI: a prospectively enrolled patient cohort

Wilson, Katharine J., Fripp, Jurgen, Lockard, Carly A., Shin, Richard C., Engstrom, Craig, Ho, Charles P. and LaPrade, Robert F. (2019). Quantitative mapping of acute and chronic PCL pathology with 3 T MRI: a prospectively enrolled patient cohort. Journal of Experimental Orthopaedics, 6 (1) 22, 22. doi: 10.1186/s40634-019-0188-2

Local contrast-enhanced MR images via high dynamic range processing

Chandra, Shekhar S., Engstrom, Craig, Fripp, Jurgen, Neubert, Ales, Jin, Jin, Walker, Duncan, Salvado, Olivier, Ho, Charles and Crozier, Stuart (2018). Local contrast-enhanced MR images via high dynamic range processing. Magnetic Resonance in Medicine, 80 (3), 1206-1218. doi: 10.1002/mrm.27109

A lightweight rapid application development framework for biomedical image analysis

Chandra, Shekhar S., Dowling, Jason A., Engstrom, Craig, Xia, Ying, Paproki, Anthony, Neubert, Aleš, Rivest-Hénault, David, Salvado, Olivier, Crozier, Stuart and Fripp, Jurgen (2018). A lightweight rapid application development framework for biomedical image analysis. Computer Methods and Programs in Biomedicine, 164, 193-205. doi: 10.1016/j.cmpb.2018.07.011

Exercise: an essential evidence-based medicine

Green, Anita, Engstrom, Craig and Friis, Peter (2018). Exercise: an essential evidence-based medicine. Medical Journal of Australia, 208 (6), 242-243. doi: 10.5694/mja18.00033

Automated T2-mapping of the Menisci From Magnetic Resonance Images in Patients with Acute Knee Injury

Paproki, Anthony, Engstrom, Craig, Strudwick, Mark, Wilson, Katharine J., Surowiec, Rachel K., Ho, Charles, Crozier, Stuart and Fripp, Jurgen (2017). Automated T2-mapping of the Menisci From Magnetic Resonance Images in Patients with Acute Knee Injury. Academic Radiology, 24 (10), 1295-1304. doi: 10.1016/j.acra.2017.03.025

Comparison of 3D bone models of the knee joint derived from CT and 3T MR imaging

Neubert, Aleš, Wilson, Katharine J., Engstrom, Craig, Surowiec, Rachel K., Paproki, Anthony, Johnson, Nicholas, Crozier, Stuart, Fripp, Jurgen and Ho, Charles P. (2017). Comparison of 3D bone models of the knee joint derived from CT and 3T MR imaging. European Journal of Radiology, 93, 178-184. doi: 10.1016/j.ejrad.2017.05.042

An open 8-channel parallel transmission coil for static and dynamic 7T MRI of the knee and ankle joints at multiple postures

Jin, Jin, Weber, Ewald, Destruel, Aurelien, O’Brien, Kieran, Henin, Bassem, Engstrom, Craig and Crozier, Stuart (2017). An open 8-channel parallel transmission coil for static and dynamic 7T MRI of the knee and ankle joints at multiple postures. Magnetic Resonance in Medicine, 79 (3), 1804-1816. doi: 10.1002/mrm.26804

Implementing an online student laboratory data repository in a first year undergraduate health science course

Engstrom, Craig, Bulmer, Michael, Newcombe, Peter and Hoffman, Ben (2017). Implementing an online student laboratory data repository in a first year undergraduate health science course. International Journal of Information and Education Technology, 7 (2), 100-105. doi: 10.18178/ijiet.2017.7.2.849

Automatic segmentation of the glenohumeral cartilages from magnetic resonance images

Neubert, A., Yang, Z., Engstrom, C., Xia, Y., Strudwick, M. W., Chandra, S. S., Fripp, J. and Crozier, S. (2016). Automatic segmentation of the glenohumeral cartilages from magnetic resonance images. Medical Physics, 43 (10), 5370-5379. doi: 10.1118/1.4961011

Are they using my feedback? The extent of students’ feedback use has a large impact on subsequent academic performance

Zimbardi, Kirsten, Colthorpe, Kay, Dekker, Andrew, Engstrom, Craig, Bugarcic, Andrea, Worthy, Peter, Victor, Ruban, Chunduri, Prasad, Lluka, Lesley and Long, Phil (2016). Are they using my feedback? The extent of students’ feedback use has a large impact on subsequent academic performance. Assessment & Evaluation in Higher Education, 42 (4), 1-20. doi: 10.1080/02602938.2016.1174187

Automated 3D quantitative assessment and measurement of alpha angles from the femoral head-neck junction using MR imaging

Xia, Ying, Fripp, Jurgen, Chandra, Shekhar S., Walker, Duncan, Crozier, Stuart and Engstrom, Craig M. (2015). Automated 3D quantitative assessment and measurement of alpha angles from the femoral head-neck junction using MR imaging. Physics in Medicine and Biology, 60 (19), 7601-7616. doi: 10.1088/0031-9155/60/19/7601

Automated analysis of hip joint cartilage combining MR T2 and three-dimensional fast-spin-echo images

Chandra, Shekhar S., Surowiec, Rachel, Ho, Charles, Xia, Ying, Engstrom, Craig M., Crozier, Stuart and Fripp, Jurgen (2015). Automated analysis of hip joint cartilage combining MR T2 and three-dimensional fast-spin-echo images. Magnetic Resonance in Medicine, 75 (1), 403-413. doi: 10.1002/mrm.25598

Automatic bone segmentation and bone-cartilage interface extraction for the shoulder joint from magnetic resonance images

Yang, Zhengyi, Fripp, Jurgen, Chandra, Shekhar S., Neubert, Ales, Xia, Ying, Strudwick, Mark, Paproki, Anthony, Engstrom, Craig and Crozier, Stuart (2015). Automatic bone segmentation and bone-cartilage interface extraction for the shoulder joint from magnetic resonance images. Physics in Medicine and Biology, 60 (4), 1441-1459. doi: 10.1088/0031-9155/60/4/1441

Statistical shape model reconstruction with sparse anomalous deformations: application to intervertebral disc herniation

Neubert, Ales, Jurgen, Fripp, Engstrom, Craig M., Schwarz, Daniel, Weber, Marc-André and Crozier, Stuart (2015). Statistical shape model reconstruction with sparse anomalous deformations: application to intervertebral disc herniation. Computerized Medical Imaging and Graphics, 46, 11-19. doi: 10.1016/j.compmedimag.2015.05.002

Automatic hip cartilage segmentation from 3D MR images using arc-weighted graph searching

Xia, Ying, Chandra, Shekhar S., Engstrom, Craig M., Strudwick, Mark W., Crozier, Stuart and Fripp, Jurgen (2014). Automatic hip cartilage segmentation from 3D MR images using arc-weighted graph searching. Physics In Medicine And Biology, 59 (23), 7245-7266. doi: 10.1088/0031-9155/59/23/7245

Validity and reliability of computerized measurement of lumbar intervertebral disc height and volume from magnetic resonance images

Neubert, Ales, Fripp, Jurgen, Engstrom, Craig, Gal, Yaniv, Crozier, Stuart and Kingsley, Michael I. C. (2014). Validity and reliability of computerized measurement of lumbar intervertebral disc height and volume from magnetic resonance images. The Spine Journal, 14 (11), 2773-2781. doi: 10.1016/j.spinee.2014.05.023

Focused shape models for hip joint segmentation in 3D magnetic resonance images

Chandra, Shekhar S., Xia, Ying, Engstrom, Craig, Crozier, Stuart, Schwarz, Raphael and Fripp, Jurgen (2014). Focused shape models for hip joint segmentation in 3D magnetic resonance images. Medical Image Analysis, 18 (3), 567-578. doi: 10.1016/j.media.2014.02.002

Automated segmentation and analysis of normal and osteoarthritic knee menisci from magnetic resonance images: data from the Osteoarthritis Initiative

Paproki, A., Engstrom, C., Chandra, S. S., Neubert, A., Fripp, J. and Crozier, S. (2014). Automated segmentation and analysis of normal and osteoarthritic knee menisci from magnetic resonance images: data from the Osteoarthritis Initiative. Osteoarthritis and Cartilage, 22 (9), 1259-1270. doi: 10.1016/j.joca.2014.06.029

Automated bone segmentation from large field of view 3D MR images of the hip joint

Xia, Ying, Fripp, Jurgen, Chandra, Shekhar S., Schwarz, Raphael, Engstrom, Craig and Crozier, Stuart (2013). Automated bone segmentation from large field of view 3D MR images of the hip joint. Physics in Medicine and Biology, 58 (20), 7375-7390. doi: 10.1088/0031-9155/58/20/7375

Three-dimensional morphological and signal intensity features for detection of intervertebral disc degeneration from magnetic resonance images

Neubert, A., Fripp, J., Engstrom, C., Walker, D., Weber, M-A., Schwarz, R. and Crozier, S. (2013). Three-dimensional morphological and signal intensity features for detection of intervertebral disc degeneration from magnetic resonance images. Journal of the American Medical Informatics Association, 20 (6), 1082-1090. doi: 10.1136/amiajnl-2012-001547

Assessment as pedagogy: a consideration of pedagogical work and the preparation of kinesiology professionals

Hay, Peter, Tinning, Richard and Engstrom, Craig (2013). Assessment as pedagogy: a consideration of pedagogical work and the preparation of kinesiology professionals. Physical Education and Sport Pedagogy, 20 (1), 31-44. doi: 10.1080/17408989.2013.788145

Promoting assessment efficacy through an integrated system for online clinical assessment of practical skills

Hay, Peter J., Engstrom, Craig, Green, Anita, Friis, Peter, Dickens, Sue and Macdonald, Doune (2013). Promoting assessment efficacy through an integrated system for online clinical assessment of practical skills. Assessment and Evaluation in Higher Education, 38 (5), 520-535. doi: 10.1080/02602938.2012.658019

Automated detection, 3D segmentation and analysis of high resolution spine MR images using statistical shape models

Neubert, A., Fripp, J., Engstrom, C., Schwarz, R., Lauer, L., Salvado, O. and Crozier, S. (2012). Automated detection, 3D segmentation and analysis of high resolution spine MR images using statistical shape models. Physics in Medicine and Biology, 57 (24), 8357-8376. doi: 10.1088/0031-9155/57/24/8357

An orthogonal-based decoupling method for MRI phased array coil design

Li, Bing Keong, Wang, Hua, Trakic, Adnan, Engstrom, Craig, Weber, Ewald and Crozier, Stuart (2012). An orthogonal-based decoupling method for MRI phased array coil design. NMR in Biomedicine, 25 (6), 835-842. doi: 10.1002/nbm.1799

Exploring the potential of assessment efficacy in sports coaching

Hay, Peter, Dickens, Sue, Crudgington, Bob and Engstrom, Craig (2012). Exploring the potential of assessment efficacy in sports coaching. International Journal of Sports Science and Coaching, 7 (2), 187-198. doi: 10.1260/1747-9541.7.2.187

Exploring the potential of assessment efficacy in sports coaching: A response to commentaries

Hay, Peter, Dickens, Sue, Crudgington, Bob and Engstrom, Craig (2012). Exploring the potential of assessment efficacy in sports coaching: A response to commentaries. International Journal of Sports Science and Coaching, 7 (2), 223-226. doi: 10.1260/1747-9541.7.2.223

Utilizing Information and Communication Technologies to optimize the efficacy of assessment in psychomotor learning contexts

Hay, Peter J. and Engstrom, Craig (2012). Utilizing Information and Communication Technologies to optimize the efficacy of assessment in psychomotor learning contexts. Global Journal of Health and Physical Education Pedagogy, 1 (2), 94-105.

Electromechanical design and construction of a rotating radio-frequency coil system for applications in magnetic resonance

Trakic, Adnan, Weber, Ewald, Li, Bing Keong, Wang, Hua, Liu, Feng, Engstrom, Craig and Crozier, Stuart (2012). Electromechanical design and construction of a rotating radio-frequency coil system for applications in magnetic resonance. IEEE Transactions on Biomedical Engineering, 59 (4), 1068-1075. doi: 10.1109/TBME.2012.2182993

Segmentation of the quadratus lumborum muscle using statistical shape modeling

Engstrom, Craig M., Fripp, Jurgen, Jurcak, Valer, Walker, Duncan G., Salvado, Olivier and Crozier, Stuart (2011). Segmentation of the quadratus lumborum muscle using statistical shape modeling. Journal of Magnetic Resonance Imaging, 33 (6), 1422-1429. doi: 10.1002/jmri.22188

Adolescent fracture implications related to growth

Bailey, D. A., Engstrom, C. M. and Walker, D. G. (2007). Adolescent fracture implications related to growth. Sport Health, 25 (2), 12-17.

Pars interarticularis stress lesions in the lumbar spine of cricket fast bowlers

Engstrom, C. M. and Walker, D. G. (2007). Pars interarticularis stress lesions in the lumbar spine of cricket fast bowlers. Medicine and Science in Sports and Exercise, 39 (1), 28-33. doi: 10.1249/01.mss.0000241642.82725.ac

Quadratus lumborum asymmetry and L4 Pars injury in fast bowlers: A prospective MR study

Engstrom, C. M., Walker, D. G., Kippers, V. and Mehnert, A. J. H. (2007). Quadratus lumborum asymmetry and L4 Pars injury in fast bowlers: A prospective MR study. Medicine and Science in Sports and Exercise, 39 (6), 910-917. doi: 10.1249/mss.0b013e3180408e25

MR morphometry of posterior tibialis muscle in adult acquired flat foot

Wacker, J., Calder, J. D. F., Engstrom, C. M. and Saxby, T. S. (2003). MR morphometry of posterior tibialis muscle in adult acquired flat foot. Foot & Ankle International, 24 (4), 354-357. doi: 10.1177/107110070302400409

Chapter 7 Temporal coordination of human gait

Abernethy, Bruce, Burgess-Limerick, Robin, Engstrom, Craig, Hanna, Alastair and Neal, Robert J. (1995). Chapter 7 Temporal coordination of human gait. Advances in Psychology, 111 (C), 171-196. doi: 10.1016/S0166-4115(06)80010-5

MORPHOMETRY OF HUMAN THIGH MUSCLES - DETERMINATION OF FASCICLE ARCHITECTURE BY MAGNETIC-RESONANCE-IMAGING

SCOTT, SH, ENGSTROM, CM and LOEB, GE (1993). MORPHOMETRY OF HUMAN THIGH MUSCLES - DETERMINATION OF FASCICLE ARCHITECTURE BY MAGNETIC-RESONANCE-IMAGING. Journal of Anatomy, 182 (2), 249-257.

MORPHOMETRY OF THE HUMAN THIGH MUSCLES - A COMPARISON BETWEEN ANATOMICAL SECTIONS AND COMPUTER TOMOGRAPHIC AND MAGNETIC-RESONANCE IMAGES

ENGSTROM, CM, LOEB, GE, REID, JG, FORREST, WJ and AVRUCH, L (1991). MORPHOMETRY OF THE HUMAN THIGH MUSCLES - A COMPARISON BETWEEN ANATOMICAL SECTIONS AND COMPUTER TOMOGRAPHIC AND MAGNETIC-RESONANCE IMAGES. Journal of Anatomy, 176, 139-156.

Manipulating medical image translation with manifold disentanglement

Liu, Siyu, Dowling, Jason A., Engstrom, Craig, Greer, Peter B., Crozier, Stuart and Chandra, Shekhar S. (2023). Manipulating medical image translation with manifold disentanglement. 2023 International Conference on Digital Image Computing: Techniques and Applications (DICTA), Port Macquarie, Australia, 28 November-1 December 2023. Piscataway, NJ, United States: Institute of Electrical and Electronics Engineers. doi: 10.1109/dicta60407.2023.00053

Semantic Segmentation of 3D Medical Images Through a Kaleidoscope: Data from the Osteoarthritis Initiative

Woo, Boyeong, Lorenzana, Marlon Bran, Engstrom, Craig, Baresic, William, Fripp, Jurgen, Crozier, Stuart and Chandra, Shekhar S. (2023). Semantic Segmentation of 3D Medical Images Through a Kaleidoscope: Data from the Osteoarthritis Initiative. ML Research Press.

Style-based manifold for weakly-supervised disease characteristic discovery

Liu, Siyu, Liu, Linfeng, Engstrom, Craig, To, Xuan Vinh, Ge, Zongyuan, Crozier, Stuart, Nasrallah, Fatima and Chandra, Shekhar S. (2023). Style-based manifold for weakly-supervised disease characteristic discovery. MICCAI 2023: 26th International Conference, Vancouver, BC, Canada, 8-12 October 2023. Heidelberg, Germany: Springer. doi: 10.1007/978-3-031-43904-9_36

Transformer compressed sensing via global image tokens

Bran Lorenzana, Marlon, Engstrom, Craig and Chandra, Shekhar S. (2022). Transformer compressed sensing via global image tokens. 2022 IEEE International Conference on Image Processing (ICIP), Bordeaux, France, 16-19 October 2022. Piscataway, NJ, United States: IEEE. doi: 10.1109/icip46576.2022.9897630

Anomaly-Aware 3D Segmentation of Knee Magnetic Resonance Images

Woo, Boyeong, Engstrom, Craig, Fripp, Jurgen, Crozier, Stuart and Chandra, Shekhar S. (2022). Anomaly-Aware 3D Segmentation of Knee Magnetic Resonance Images. ML Research Press.

Can3d: Fast 3D knee mri segmentation via compact context aggregation

Dai, Wei, Woo, Boyeong, Liu, Siyu, Marques, Matthew, Tang, Fangfang, Crozier, Stuart, Engstrom, Craig and Chandra, Shekhar (2021). Can3d: Fast 3D knee mri segmentation via compact context aggregation. 2021 IEEE 18th International Symposium on Biomedical Imaging (ISBI), Nice, France, 13-16 April 2021. Piscataway, NJ United States: IEEE. doi: 10.1109/isbi48211.2021.9433784

Fast high dynamic range MRI by Contrast Enhancement Networks

Marques, Matthew, Engstrom, Craig, Fripp, Jurgen, Crozier, Stuart and Chandra, Shekhar S. (2020). Fast high dynamic range MRI by Contrast Enhancement Networks. 2020 IEEE 17th International Symposium on Biomedical Imaging (ISBI), Iowa City, IA, United States, 3-7 April 2020. Piscataway, NJ, United States: Institute of Electrical and Electronics Engineers . doi: 10.1109/isbi45749.2020.9098373

Supervised exercise programs to enhance the health and well-being of medical students: a 12 month progress report of a cross-faculty student service program

Hume, Emily, Barry, Benjamin and Engstrom, Craig (2020). Supervised exercise programs to enhance the health and well-being of medical students: a 12 month progress report of a cross-faculty student service program. ANZAHPE 2020 Conference, Melbourne, QLD Australia, 12-15 July 2020. Melbourne, VIC Australia: Australian & New Zealand Association for Health Professional Educators.

Supervised exercise programs to enhance the health and well-being of medical students: a cross-faculty student service program

Barry, Benjamin K. , Frawley, Emily , Crabb, Meagan , Steele, Megan , Jansen, Pieter and Engstrom, Craig (2019). Supervised exercise programs to enhance the health and well-being of medical students: a cross-faculty student service program. ANZAHPE 2019 Conference, Canberra, ACT Australia, 1-4 July 2019. Canberra, ACT Australia: Australian & New Zealand Association for Health Professional Educators.

Automated cartilage segmentation from 3D MR images of hip joint using an ensemble of neural networks

Xia, Ying , Manjón, Jose V. , Engstrom, Craig , Crozier, Stuart, Salvado, Olivier and Fripp, Jurgen (2017). Automated cartilage segmentation from 3D MR images of hip joint using an ensemble of neural networks. International Symposium on Biomedical Imaging , Melbourne, VIC, Australia, 18-21 April 2017. Piscataway, NJ, United States: IEEE Computer Society. doi: 10.1109/ISBI.2017.7950701

Automated intervertebral disc segmentation using probabilistic shape estimation and active shape models

Neubert, Aleš, Fripp, Jurgen, Chandra, Shekhar S., Engstrom, Craig and Crozier, Stuart (2016). Automated intervertebral disc segmentation using probabilistic shape estimation and active shape models. Third International Workshop and Challenge, CSI 2015, Munich, Germany, 5 October 2015. Switzerland: Springer. doi: 10.1007/978-3-319-41827-8_15

Automated segmentation and T2-mapping of the posterior cruciate ligament from MRI of the knee: data from the osteoarthritis initiative

Paproki, Anthony, Wilson, Katharine J., Surowiec, Rachel K., Ho, Charles P., Pant, Abinash, Bourgeat, Pierrick, Engstrom, Craig, Crozier, Stuart and Fripp, Jurgen (2016). Automated segmentation and T2-mapping of the posterior cruciate ligament from MRI of the knee: data from the osteoarthritis initiative. IEEE International Symposium on Biomedical Imaging (ISBI), Prague, Czech Republic, 13-16 April 2016. Piscataway, NJ, United States: IEEE. doi: 10.1109/ISBI.2016.7493298

Incremental shape learning of 3D surfaces of the knee, data from the osteoarthritis initiative

Neubert, Ales, Naser, Ibrahim, Paproki, Anthony, Engstrom, Craig, Fripp, Jurgen, Crozier, Stuart and Chandra, Shekhar S. (2016). Incremental shape learning of 3D surfaces of the knee, data from the osteoarthritis initiative. 2016 IEEE 13th International Symposium on Biomedical Imaging (ISBI), Prague, Czech Republic, 13-16 April, 2016. Piscataway, United States: IEEE Operations Center. doi: 10.1109/ISBI.2016.7493406

Shape reconstruction using EM-ICP mesh registration and robust statistical shape models

Neubert, Ales, Chandra, Shekhar S., Engstrom, Craig, Fripp, Jurgen and Crozier, Stuart (2015). Shape reconstruction using EM-ICP mesh registration and robust statistical shape models. Symposium on Statistical Shape Models Applications, Delemont, Switzerland, 30 September - 2 October, 2015.

Automatic Bone Segmentation for Shoulder {MRI} using Statistical Shape Models

Yang, Zhengyi, Fripp, Jurgen, Engstrom, Craig, Chandra, Shekhar, Xia, Ying, Paproki, Anthony, Strudwick, Mark, Neubert, Ales and Crozier, Stuart (2014). Automatic Bone Segmentation for Shoulder {MRI} using Statistical Shape Models. 2014 – Joint Annual Meeting ISMRM-ESMRMB, 22nd Scientific Meeting and Exhibition, Milan, Italy, 10-16 May 2014. Berkeley, CA United States: International Society for Magnetic Resonance in Medicine.

Segmentation of lumbar intervertebral discs from high-resolution 3D MR images using multi-level statistical shape models

Neubert, Aleš, Fripp, Jurgen, Engstrom, Craig and Crozier, Stuart (2014). Segmentation of lumbar intervertebral discs from high-resolution 3D MR images using multi-level statistical shape models. 16th International Conference on Medical Image Computing and Computer Assisted Intervention, Nagoya, Japan, 22-26 September 2013. Heidelberg, Germany: Springer. doi: 10.1007/978-3-319-07269-2_15

Automatic quantification of 3D morphology and appearance of intervertebral discs in high resolution MRI

Neubert, Ales, Fripp, Jurgen, Engstrom, Craig, Walker, Duncan, Schwarz, Raphael and Crozier, Stuart (2013). Automatic quantification of 3D morphology and appearance of intervertebral discs in high resolution MRI. International Society for Magnetic Resonance in Medicine, 21st Annual Meeting and Exhibition, Salt Lake City, UT, United States, 20-26 April 2013. New York, NY, United States: International Society of Magnetic Resonance in Medicine.

Enhancing feedback provision and use through in situ audio commenting

Colthorpe, K. L., Zimbardi, K., Dekker, A., Hay, P., Engstrom, C., Bugarcic, A., Long, P., Lluka, L. J., Chunduri, P., Worthy, P. and Marrington, J. (2013). Enhancing feedback provision and use through in situ audio commenting. IUPS 2013: International Union of Physiological Societies XXXVII Congress, Birmingham, UK, 21-26 July, 2013. Oxford, UK: London Physiological Society.

Enhancing feedback provision and use to promote learning through assessment

Colthorpe, Kay, Zimbardi, Kirsten, Dekker, Andrew, Hay, Peter, Engstrom, Craig, Bugarcic, Andrea, Long, Phil, Lluka, Lesley, Chunduri, Prasad and Worthy, Pete (2013). Enhancing feedback provision and use to promote learning through assessment. 36th HERDSA Annual Conference, Auckland, New Zealand, 1-4 July, 2013.

A pilot interprofessional module between medical students and human movement studies students based around a 10 week exercise program.

Engstrom, C., Hay, P., Green, A., Friis, P., Myers, P., Fraser, J. and Schafer, J. (2012). A pilot interprofessional module between medical students and human movement studies students based around a 10 week exercise program.. Centre for Medical Education Research and Scholarship (CMEDRS) Learning and Teaching Conference 2011, UQ Herston Campus, 8-9 November 2012.

Automated bone segmentation and bone-cartilage interface extraction from MR images of the hip

Xia, Ying, Chandra, Shakes, Salvado, Oliver, Fripp, Jurgen, Schwartz, Raphael, Lauer, Lars, Engstrom, Craig M. and Crozier, Stuart (2012). Automated bone segmentation and bone-cartilage interface extraction from MR images of the hip. International Society for Magnetic Resonance in Medicine, Melbourme, VIC, Australia, 5-11 May 2012.

Examining the use of in-situ audio annotations to provide feedback to students

Dekker, Andrew, Zimbardi, Kirsten, Long, Phil, Hay, Peter, Engstrom, Craig, Bugarcic, Andrea, Colthorpe, Kay, Lluka, Lesley, Chunduri, Prasad, Marrington, Justin and Worthy, Peter (2012). Examining the use of in-situ audio annotations to provide feedback to students. SoLAR Southern Flare Conference, Sydney, Australia, 29-30 November 2012.

Femoroacetabular impingement in former high performance male water polo players

Melville, P., Engstrom, C., Bailey, D. and Daley, S. (2012). Femoroacetabular impingement in former high performance male water polo players. Be Active 2012, Sydney, NSW, 31 October -3 November 2012. Chatswood, NSW Australia: Elsevier. doi: 10.1016/j.jsams.2012.11.589

Morphology-based interslice interpolation on manual segmentations of joint bones and muscles in MRI

Yang, Zhengyi, Crozier, Stuart, Engstrom, Craig, Xia, Ying, Neubert, Ales, Brancato, Tania, Schwarz, Raphael, Lauer, Lars, Fripp, Jurgen, Chandra, Shekhar and Salvado, Olivier (2012). Morphology-based interslice interpolation on manual segmentations of joint bones and muscles in MRI. 2012 International Conference on Digital Image Computing Techniques and Applications (DICTA), Fremantle, WA, Australia, 3-5 December 2012. Piscataway, NJ, United States: IEEE. doi: 10.1109/DICTA.2012.6411678

Multi-directional MSK phased array wrist coil

Li, Bing Keong, Weber, Ewald, Bartel, Fabian, Hunt, Dean, Engstrom, Craig, Trakic, Adnan, Demetriades,Tim and Crozier, Stuart (2012). Multi-directional MSK phased array wrist coil. 20th Annual Meeting of the International Society for Magnetic Resonance in Medicine (ISMRM), Melbourne, Australia, 5-11 May 2012.

Muscle morphometry of the individual hamstring muscles in semi-elite AFL players: Preliminary findings from a longitudinal study

Brancato, T., Engstrom, C. and Fripp, J. (2012). Muscle morphometry of the individual hamstring muscles in semi-elite AFL players: Preliminary findings from a longitudinal study. Be Active 2012, Sydney, NSW Australia, 31 October - 3 November 2012. Chatswood, NSW Australia: Elsevier. doi: 10.1016/j.jsams.2012.11.237

Open phased array knee coil for dynamic MSK MRI

Li, Bing Keong, Weber, Ewald, Bartel, Fabian, Morris, Dru, Engstrom, Craig, Trakic, Adnan, Wang, Hua, Kelly, Ben and Crozier, Stuart (2012). Open phased array knee coil for dynamic MSK MRI. 20th Annual Meeting of the International Society for Magnetic Resonance in Medicine (ISMRM), Melbourne, Australia, 5-11 May 2012.

UQMarkUP: effective feedback and consistent assessment for large cohorts with e-learning enabled ‘in situ’ commenting

Colthorpe, K., Dekker, A., Zimbardi, K., Long, P., Lluka, L. J., Chunduri, P., Bugarcic, A., Hay, P., Engstrom, C., Worthy, P. and Marrington, J. (2012). UQMarkUP: effective feedback and consistent assessment for large cohorts with e-learning enabled ‘in situ’ commenting. 2nd Annual CUBEnet Forum, Sydney, NSW, Australia, 10-11 December 2012.

Unilateral hip joint segmentation with shape priors learned from missing data

Chandra, Shekhar, Xia, Yinq, Engstrom, Craig, Schwarz, Raphael, Lauer, Lars, Crozier, Stuart, Salvado, Olivier and Fripp, Jurgen (2012). Unilateral hip joint segmentation with shape priors learned from missing data. 9th IEEE International Symposium on Biomedical Imaging (ISBI), Barcelona, Spain, 2-5 March 2012. Piscataway, NJ, United States: IEEE. doi: 10.1109/ISBI.2012.6235909

Automated 3D segmentation of vertebral bodies and intervertebral discs from MRI

Neubert, Ales, Fripp, Jurgen, Shen, Kaikai, Salvado, Olivier, Schwarz, Raphael, Lauer, Lars, Engstrom, Craig and Crozier, Stuart (2011). Automated 3D segmentation of vertebral bodies and intervertebral discs from MRI. International Conference on Digital Image Computing Techniques and Applications (DICTA), Noosa, QLD, Australia, 6-8 December 2011. Piscataway, NJ, United States: IEEE. doi: 10.1109/DICTA.2011.12

Automated MR hip bone segmentation

Xia, Ying, Chandra, Shakes, Salvado, Olivier, Fripp, Jurgen, Schwarz, Raphael, Lauer, Lars, Engstrom, Craig and Crozier, Stuart (2011). Automated MR hip bone segmentation. International Conference on Digital Image Computing Techniques and Applications (DICTA), Noosa, QLD, Australia, 6-8 December 2011. Piscataway, NJ, United States: IEEE. doi: 10.1109/DICTA.2011.13

Automated segmentation of lumbar vertebral bodies and intervertebral discs from MRI using statistical shape models

Neubert, Ales, Fripp, Jurgen, Shen, Kaikai, Engstrom, Craig, Schwarz, Raphael, Lauer, Lars, Salvado, Olivier and Crozier, Stuart (2011). Automated segmentation of lumbar vertebral bodies and intervertebral discs from MRI using statistical shape models. International Society for Magnetic Resonance in Medicine, 19th Scientific Meeting & Exhibition, Montréal, QC, Canada, 7 - 13 May 2011. Berkeley, CA, United States: ISMRM.

Morphometric analyses of the hamstring muscles using MRI: What is the best way?

Brancato, T., Engstrom, C. and Fripp, J. (2011). Morphometric analyses of the hamstring muscles using MRI: What is the best way?. Australian Conference of Science and Medicine in Sport ``Optimising health and fitness–Participation, prevention and performance'' , Fremantle, Western Australia, 19-22 October 2011. Chatswood, NSW, Australia: Elsevier. doi: 10.1016/j.jsams.2011.11.125

Relaxed image foresting transforms for interactive volume image segmentation

Malmberg, Filip, Nyström, Ingela, Mehnert, Andrew, Engstrom, Craig and Bengtsson, Ewert (2011). Relaxed image foresting transforms for interactive volume image segmentation. Medical Imaging 2010: Image Processing, San Diego, California, USA, 14 February 2010. Bellingham, Wash., U.S.A.: SPIE. doi: 10.1117/12.840019

e-CAPS - An innovative web-based online system for clinical assessment of practical skills in joint examination

Engstrom, C., Green, A., Hay, P., Friiis, P., Myers, P., Fraser, J. and Schafer, J. (2011). e-CAPS - An innovative web-based online system for clinical assessment of practical skills in joint examination. Australian Conference of Science and Medicine in Sport, *, 19-22 October 2011. Chatswood, NSW, Australia: Elsevier. doi: 10.1016/j.jsams.2011.11.130

An orthogonality based RF decoupling method

Wang, Hua, Li, Joe, Trakic, Adnan, Engstrom, Craig M., Li, Yu and Crozier, Stuart (2010). An orthogonality based RF decoupling method. ISMRM, Stockholm, Sweden, 1-7 May, 2010. New York, NY, U.S.A.: International Society of Magnetic Resonance in Medicine.

Automated segmentation of the menisci from MR images

Fripp, Jurgen, Bourgat, Pierrick, Engstrom, Craig, Ourselin, Sebastien, Crozier, Stuart and Salvado, Olivier (2009). Automated segmentation of the menisci from MR images. IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2009. ISBI '09, Boston, MA, USA, 28 June - 1 July, 2009. Online Proceedings: IEEE Explore Digital Library. doi: 10.1109/ISBI.2009.5193096

Promoting assessment authenticity and efficacy through an integrated system for online clinical assessment of practical skills

Engstrom, Craig, Hay, Peter, Macdonald, Doune, Green, Anita and Friis, Peter (2009). Promoting assessment authenticity and efficacy through an integrated system for online clinical assessment of practical skills. Assessment in Different Dimensions: A conference on teaching and learning in tertiary education, Melbourne, 19-20 November, 2009. Melbourne: RMIT.

Atlas based automated segmentation of the quadratus lumborum muscle using non-rigid registration on magnetic resonance images of the thoracolumbar region

Jurcak,V., Fripp, J., Engstrom, C., Walker, D., Salvado, O., Ourselin, S. and Crozier, S. (2008). Atlas based automated segmentation of the quadratus lumborum muscle using non-rigid registration on magnetic resonance images of the thoracolumbar region. 5th IEEE International Symposium on Biomedical Imaging - From Nano to Macro, Paris, France, 14-17 May 2008. New York, USA: IEEE. doi: 10.1109/ISBI.2008.4540945

Automated segmentation of the quadratus lumborum muscle from magnetic resonance images using a hybrid atlas based - geodesic active contour scheme

Jurcak,V., Fripp, J., Engstrom, C., Walker, D., Salvado, O., Ourselin, S. and Crozier, S. (2008). Automated segmentation of the quadratus lumborum muscle from magnetic resonance images using a hybrid atlas based - geodesic active contour scheme. 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2008, Vancouver, Canada, 20-25 Aug 2008. New York, USA: IEEE. doi: 10.1109/IEMBS.2008.4649291

Reproducibility of Automatic Quantitative Analysis of the Articular Cartilages from MEDIC and weDESS Magnetic Resonance Images of the Knee at 1.5T

Fripp, J., Jurcak, V., Holt, R., Ourselin, S., Engstrom, C. and Crozier, S. (2008). Reproducibility of Automatic Quantitative Analysis of the Articular Cartilages from MEDIC and weDESS Magnetic Resonance Images of the Knee at 1.5T. The International Society for Magnetic Resonance in Medicine's 16th Scientific Meeting and Exhibition, Toronto, Ontario, Canada, 3-9 May 2008. USA: International Society for Magnetic Resonance in Medicine.

Development of symptomatic L4 pars lesions in fast bowlers is not related to pre-existing L5 defects of bowling arm side

Engstrom, C.M. (2005). Development of symptomatic L4 pars lesions in fast bowlers is not related to pre-existing L5 defects of bowling arm side. 2005 Australian Conference of Science and Medicine in Sports, Melbourne, 13-16 October, 2005. Dickson, ACT: Sports Medicine Australia.

Quadratus lumborum asymmetry predicts spinal stress fractures in cricket fast bowlers in a 5-year prospective study using MRI

Walker, D. and Engstrom, C. (2005). Quadratus lumborum asymmetry predicts spinal stress fractures in cricket fast bowlers in a 5-year prospective study using MRI. 105th Annual Meeting of the American Roentgen Ray Society, New Orleans, LA, 15th - 20th May , 2005. Leesburg, Va.: American Roentgen Ray Society.

Development of a model of stress fractures in the lumbar vertebrae of cricket fast bowlers

De Visser, H., Engstrom, C. M., Adam, C. J., Crozier, S. and Pearcy, M. J. (2004). Development of a model of stress fractures in the lumbar vertebrae of cricket fast bowlers. Spineweek 2004, Porto, Portugal, 31 May - 5 June, 2004.

Kinetics of the post block foot contacts in sprint running

Watts, M. C., Mallett, C. J. and Engstrom, C.M. (2004). Kinetics of the post block foot contacts in sprint running. Hot Topics from the Red Centre, Alice Springs, 6-9 October 2004. Dickson, ACT: Sports Medicine Australia.

The pathomechanics of L4 stress fractures

Engstrom, C.M. (2004). The pathomechanics of L4 stress fractures. Evidence Based Sports Medicine: Dispelling the Myths, Townsville, 24-25 April 2004. St Lucia: SMA (Queensland Branch).

Quadratus lumborum asymmetry and pars interatricularis injury in cricket fast bowlers: A prospective MRI examination

Engstrom, C. M., Walker, D., Kippers, V. and Buckley, R. (2000). Quadratus lumborum asymmetry and pars interatricularis injury in cricket fast bowlers: A prospective MRI examination. International Congress on Sport Science, Sports Medicine and Physical Education, Brisbane, 7-12 September 2000. Belconnen, ACT: Sports Medicine Australia.

A prospective study on back injury and muscle morphometry in junior cricket fast bowlers

Engstrom, C. M., Walker, D., Kippers, V., Hunter, J., Hanna, A. J. and Buckley, R. (1999). A prospective study on back injury and muscle morphometry in junior cricket fast bowlers. 5th IOC World Congress on Sport Sciences, Sydney, 31 Oct-5 Nov, 1999. Canberra: Sports Medicine Aust..

Biopsy injury to vastus lateralis

Engstrom, C. M., Walker, D., Buckley, R., Barnett, C., Jenkins, D. G. and Abernethy, P. J. (1999). Biopsy injury to vastus lateralis. Musculo-Skeletal Injuries: Prevention, Management and Rehabilitation, Coolum, 1-3 May, 1999. St Lucia: Sports Medicine Aust..

Evaluating lumbar spine injuries in young athletes with magnetic resonance imaging

Walker, D., Engstrom, C. M. and Buckley, R. (1999). Evaluating lumbar spine injuries in young athletes with magnetic resonance imaging. Fifth IOC World Congress, Sydney, 31 Oct-5 Nov, 1999. Canberra: Sports Medicine Aust..

Osteoarthritis Initiative (OAI) - UQ

Woo, Boyeong , Chandra, Shekhar S. , Engstrom, Craig and Crozier, Stuart (2022). Osteoarthritis Initiative (OAI) - UQ. The University of Queensland. (Dataset) doi: 10.48610/d8e13fb

eCAPS

Engstrom, Craig M. and Hay, Peter J. (2013). eCAPS. The University of Queensland. (Collection)

Simulated learning environment exercise physiology curriculum report

Barry, Benjamin, Groeller, Herb, Morris, Norm, Worringham, Charles, Raynor, Annette, Newton, Robert, Engstrom, Craig, Hay, Peter, Long, Philip, Jones, Philip, Moore, Keri, Ben-Naim, Dror, Hobson-Powell, Anita, Sharman, Melanie and Gillam, Ian (2011). Simulated learning environment exercise physiology curriculum report. Health Workforce Australia Simulated Learning Environments Sydney: Health Workforce Australia.

Lesions of the pars interarticularis in the lumbar spine of cricket fast bowlers

Engstrom, Craig (2005). Lesions of the pars interarticularis in the lumbar spine of cricket fast bowlers. PhD Thesis, School of Human Movement Studies, The University of Queensland. doi: 10.14264/107318