The University of Queensland

Neurodesk: an accessible, flexible and portable data analysis environment for reproducible neuroimaging

Renton, Angela I., Dao, Thuy T., Johnstone, Tom, Civier, Oren, Sullivan, Ryan P., White, David J., Lyons, Paris, Slade, Benjamin M., Abbott, David F., Amos, Toluwani J., Bollmann, Saskia, Botting, Andy, Campbell, Megan E. J., Chang, Jeryn, Close, Thomas G., Dörig, Monika, Eckstein, Korbinian, Egan, Gary F., Evas, Stefanie, Flandin, Guillaume, Garner, Kelly G., Garrido, Marta I., Ghosh, Satrajit S., Grignard, Martin, Halchenko, Yaroslav O., Hannan, Anthony J., Heinsfeld, Anibal S., Huber, Laurentius, Hughes, Matthew E. ... Bollmann, Steffen (2024). Neurodesk: an accessible, flexible and portable data analysis environment for reproducible neuroimaging. Nature Methods, 21 (2), 804-808. doi: 10.1038/s41592-023-02145-x

Neurodesk: an accessible, flexible and portable data analysis environment for reproducible neuroimaging

Renton, Angela I., Dao, Thuy T., Johnstone, Tom, Civier, Oren, Sullivan, Ryan P., White, David J., Lyons, Paris, Slade, Benjamin M., Abbott, David F., Amos, Toluwani J., Bollmann, Saskia, Botting, Andy, Campbell, Megan E. J., Chang, Jeryn, Close, Thomas G., Dörig, Monika, Eckstein, Korbinian, Egan, Gary F., Evas, Stefanie, Flandin, Guillaume, Garner, Kelly G., Garrido, Marta I., Ghosh, Satrajit S., Grignard, Martin, Halchenko, Yaroslav O., Hannan, Anthony J., Heinsfeld, Anibal S., Huber, Laurentius, Hughes, Matthew E. ... Bollmann, Steffen (2024). Neurodesk: an accessible, flexible and portable data analysis environment for reproducible neuroimaging. Nature Methods, 21 (5), 804-808. doi: 10.1038/s41592-023-02145-x

A binge high sucrose diet provokes systemic and cerebral inflammation in rats without inducing obesity

Patkar, Omkar L., Mohamed, Abdalla Z., Narayanan, Ashwin, Mardon, Karine, Cowin, Gary, Bhalla, Rajiv, Stimson, Damion H. R., Kassiou, Michael, Beecher, Kate, Belmer, Arnauld, Alvarez Cooper, Ignatius, Morgan, Michael, Hume, David A., Irvine, Katharine M., Bartlett, Selena E., Nasrallah, Fatima and Cumming, Paul (2021). A binge high sucrose diet provokes systemic and cerebral inflammation in rats without inducing obesity. Scientific Reports, 11 (1) 11252, 11252. doi: 10.1038/s41598-021-90817-z

QSMxT: Robust masking and artifact reduction for quantitative susceptibility mapping

Stewart, Ashley Wilton, Robinson, Simon Daniel, O’Brien, Kieran, Jin, Jin, Widhalm, Georg, Hangel, Gilbert, Walls, Angela, Goodwin, Jonathan, Eckstein, Korbinian, Tourell, Monique, Morgan, Catherine, Narayanan, Aswin, Barth, Markus and Bollmann, Steffen (2021). QSMxT: Robust masking and artifact reduction for quantitative susceptibility mapping. Magnetic Resonance in Medicine, 87 (3), 1289-1300. doi: 10.1002/mrm.29048

Putting the trust into trusted data repositories: a federated solution for the Australian National Imaging Facility

Mehnert, Andrew James, Janke, Andrew, Gruwel, Marco, Goscinski, Wojtek James, Close, Thomas, Taylor, Dean, Narayanan, Aswin, Vidalis, George, Galloway, Graham and Treloar, Andrew (2019). Putting the trust into trusted data repositories: a federated solution for the Australian National Imaging Facility. International Journal of Digital Curation, 14 (1), 102-113. doi: 10.2218/ijdc.v14i1.594

Investigating the computational reproducibility of Neurodesk

Dao, Thuy, Renton, Angela, Narayanan, Aswin, Barth, Markus and Bollmann, Steffen (2023). Investigating the computational reproducibility of Neurodesk. International Society for Magnetic Resonance in Medicine, Toronto, ON, Canada, 3-8 June 2023.

Investigating the computational reproducibility of Neurodesk

Dao, Thuy, Renton, Angela, Narayanan, Aswin, Barth, Markus and Bollmann, Steffen (2022). Investigating the computational reproducibility of Neurodesk. International Society for Magnetic Resonance in Medicine ANZ Chapter, Sydney, NSW, Australia, 12-13 November 2022.

QSMxT: a fully automated, quantitative susceptibility mapping pipeline

Stewart, Ashley, Robinson, Simon Daniel, O’Brien, Kieran, Jin, Jin, Walls, Angela, Narayanan, Aswin, Barth, Markus and Bollman, Steffen (2021). QSMxT: a fully automated, quantitative susceptibility mapping pipeline. AusIron 2021, Brisbane, QLD Australia, 29 November 2021. Brisbane, QLD Australia: QIMR Berghofer Medical Research Institute.

QSMxT:a fully automated, quantitative susceptibility mapping pipeline

Stewart, Ashley Wilton, Robinson, Simon Daniel, O’Brien, Kieran, Jin, Jin, Walls, Angela, Narayanan, Aswin, Barth, Markus and Bollmann, Steffen (2021). QSMxT:a fully automated, quantitative susceptibility mapping pipeline. 3rd Annual Meeting of the ISMRM ANZ Chapter, 2021, Online, 22-23 November. International Society for Magnetic Resonance in Medicine ANZ Chapter.

QSMxT - a cross-platform, flexible, lightweight, and scalable processing pipeline for quantitative susceptibility mapping

Stewart, Ashley, Robinson, Simon Daniel, O'Brien, Kieran, Jin, Jin, Walls, Angela, Narayanan, Aswin, Barth, Markus and Bollmann, Steffen (2021). QSMxT - a cross-platform, flexible, lightweight, and scalable processing pipeline for quantitative susceptibility mapping. ISMRM 2021, Online, 15-21 May 2021. Concord, CA USA: International Society for Magnetic Resonance in Medicine.

Spiritual Sangeet

Mani, Charulatha, Narayanan, Aswin and Shreshta, Dheeraj (2022). Spiritual Sangeet. Brisbane, Australia: The University of Queensland, School of Music.